fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G30395.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb006955 not found in 222aa AT2G30395.1 1st_1st 0.216957605 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G30395.1     MRVKATLINFKSKLSKSCNRFVSLFRFRVKRPVFIRPLRARHGNV-------KPRHQHHH
Sb006955_Sorbi1 -------MPLCCVECKPCNGHGAFFKSR--RPA--QQLRRALGKMLVSGTRRRPRRPGSF
                       : : .  .*.** . ::*: *  **.  : **   *::       :**:   .

AT2G30395.1     SKK-----PICSCLCFLNSSKNHKMSNAKHRSSSFSVNDDDYSKFMQSPLTPATAKKLFT
Sb006955_Sorbi1 SSVRAVFWPLMSM-----------------RSEADARPPTDFSPDVTVSSSGARAPRSTT
                *.      *: *                  **.: :    *:*  :  . : * * :  *

AT2G30395.1     SPITTPYSSR-------TRK-------SLNARDTFEDNA-----------VEDACRSFEN
Sb006955_Sorbi1 ADRVLALQARLGGEGEATRAPPPQPQLQLTAAVAAGDEAKAIVVSHGCGDVEAACRSFER
                :  . . .:*       **        .*.*  :  *:*           ** ******.

AT2G30395.1     YLIHLIVEEGKIDDLMDIEELLFCWKNLKSPVFIELVSRFYGELCRDLFSGE--------
Sb006955_Sorbi1 HLVEMLVEERKVMDLTDVEELLCCWEQLRCPAFVRLVGRFYGELCMDLFSSAQDADDVWS
                :*:.::*** *: ** *:**** **::*:.*.*:.**.******* ****.         

AT2G30395.1     ----------
Sb006955_Sorbi1 SQSDSEDLSV
BoxShade v3.31 C (beta, 970507) Output
AT2G30395.1     M R V K A T L I N F K S K L S K S C N R F V S L F R F R V K R P V F I R P L R A R H G N V - - - - - - - K P R H Q H H H
Sb006955_Sorbi1    - - - - - - - M P L C C V E C K P C N G H G A F F K S R - - R P A - - Q Q L R R A L G K M L V S G T R R R P R R P G S F
 
AT2G30395.1     S K K - - - - - P I C S C L C F L N S S K N H K M S N A K H R S S S F S V N D D D Y S K F M Q S P L T P A T A K K L F T
Sb006955_Sorbi1    S S V R A V F W P L M S M - - - - - - - - - - - - - - - - - R S E A D A R P P T D F S P D V T V S S S G A R A P R S T T
 
AT2G30395.1     S P I T T P Y S S R - - - - - - - T R K - - - - - - - S L N A R D T F E D N A - - - - - - - - - - - V E D A C R S F E N
Sb006955_Sorbi1    A D R V L A L Q A R L G G E G E A T R A P P P Q P Q L Q L T A A V A A G D E A K A I V V S H G C G D V E A A C R S F E R
 
AT2G30395.1     Y L I H L I V E E G K I D D L M D I E E L L F C W K N L K S P V F I E L V S R F Y G E L C R D L F S G E - - - - - - - -
Sb006955_Sorbi1    H L V E M L V E E R K V M D L T D V E E L L C C W E Q L R C P A F V R L V G R F Y G E L C M D L F S S A Q D A D D V W S
 
AT2G30395.1     - - - - - - - - - -
Sb006955_Sorbi1    S Q S D S E D L S V
 
0