fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G30395.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm004894 not found in 185aa AT2G30395.1 1st_1st 0.324189526 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G30395.1     MRVKATLINFKSKLSKSCNRFVSLFRFRVKRPVFIRPLRAR-HGNVKPRHQHHHSKKP-I
gm004894_Glyma0 MKGKALGV-FKSKLLKPCKKLLLFFRLKPKKYLFIRALKFRAHKSTFPK---AFPRKPTI
                *: **  : ***** *.*:::: :**:: *: :***.*: * * .. *:    ..:** *

AT2G30395.1     CSCL---CFLNSSKNHKMSNAKHRSSSFSVNDDDYSKFMQSPLTPAT-----AKKLFTSP
gm004894_Glyma0 MSSLLQSVFRSPKKSKHADTLQGLKSPSNVHE---TPFFPSPLTPACVMAHGAEKM----
                 *.*    * ...*.:: .. :  .*. .*::   : *: ******      *:*:    

AT2G30395.1     ITTPYSSRTRKSLNARDTFEDNAVEDACRSFENYLIHLIVEEGKIDDLMDIEELLFCWKN
gm004894_Glyma0 ----EASRQE-------------VEDACRSFENYLVEMIVEEGKTRDLMDVEELLYCWKN
                     :** .             ************:.:******  ****:****:****

AT2G30395.1     LKSPVFIELVSRFYGELCRDLFSGE--------
gm004894_Glyma0 LRCPVFIDLVSRFYGELCKDLFSPDSEEGDSSK
                *:.****:**********:**** :
BoxShade v3.31 C (beta, 970507) Output
AT2G30395.1     M R V K A T L I N F K S K L S K S C N R F V S L F R F R V K R P V F I R P L R A R - H G N V K P R H Q H H H S K K P - I
gm004894_Glyma0    M K G K A L G V - F K S K L L K P C K K L L L F F R L K P K K Y L F I R A L K F R A H K S T F P K - - - A F P R K P T I
 
AT2G30395.1     C S C L - - - C F L N S S K N H K M S N A K H R S S S F S V N D D D Y S K F M Q S P L T P A T - - - - - A K K L F T S P
gm004894_Glyma0    M S S L L Q S V F R S P K K S K H A D T L Q G L K S P S N V H E - - - T P F F P S P L T P A C V M A H G A E K M - - - -
 
AT2G30395.1     I T T P Y S S R T R K S L N A R D T F E D N A V E D A C R S F E N Y L I H L I V E E G K I D D L M D I E E L L F C W K N
gm004894_Glyma0    - - - - E A S R Q E - - - - - - - - - - - - - V E D A C R S F E N Y L V E M I V E E G K T R D L M D V E E L L Y C W K N
 
AT2G30395.1     L K S P V F I E L V S R F Y G E L C R D L F S G E - - - - - - - -
gm004894_Glyma0    L R C P V F I D L V S R F Y G E L C K D L F S P D S E E G D S S K
 
0