fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G30400.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb008935 not found in 165aa AT2G30400.1 1st_1st 0.198113207 Ib
Pt005397 not found in 405aa AT2G30400.1 1st_1st 0.235849056 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G30400.1     MGNYKFRISEMLPNAWFHKLKDV--------TKHSKPKNKASSS--SSNTCSK-KKPSSD
Sb008935_Sorbi1 ----------------------------------------------MTKPAAK-------
pt005397_POPTR_ MGNNRFRLSDMMPNAWFYKLKEMGKTRNHNTTTHSIKKRQATSAAETQQPPSKPKHPQYN
                                                                :. :*       

AT2G30400.1     SLPQHSYF-SNSLVANNPPHHNSPRNSLHT------------KKMSKRKTLYKPSLKPLT
Sb008935_Sorbi1 ----------RE------------------------------------------------
pt005397_POPTR_ PYPRKSYYITRELISSEQIPHTSPRNSKSTYTNFPDPPRRSSNQRNRRRTI-KASPKHVS
                          ..                                                

AT2G30400.1     --------------PPPLLVSASFNKSKINDQDSSYSLFPAIETSPESFVYSFYEEDDDD
Sb008935_Sorbi1 ----------------PDV-----------------------------------------
pt005397_POPTR_ AGCNCRATLWTKSDSPPDYSASLYDGSLDQETDFSDSFPPEFKSDSALATVSF------D
                                *                                           

AT2G30400.1     EFVEFSN---------------FKINTKNKAFTKQKVKVIDS---VEKACTASKP-----
Sb008935_Sorbi1 ----------CQL-----------VDKH-----------------IDVLAHATR------
pt005397_POPTR_ KMLSWSSSCDCKLDSIDNDGIVISVDKKSTARNLDNPKVFHSISDLDLPPIVTKPAKFDD
                                        ::.:                 ::    .::      

AT2G30400.1     ----------------IKKPQK-------SHLSVKISRDED--DNEYKAEKKYQRQVSSG
Sb008935_Sorbi1 ----------------RASP---------------VVPEQS------KL-KPPRRSVSS-
pt005397_POPTR_ QLEDTKKKETQEPTKYRRSPAKYEETNAHASLSVKVVKEESIAVKEYKT-SSVRRNSVT-
                                  .*               :  ::.      *  .  :*.  : 

AT2G30400.1     RKPSAGINLK-RVNSPRIQLSG----------TRRSTSRRSESKQD------VLESFAVM
Sb008935_Sorbi1 ---SSARRLKTRANTPRLASSK-----KCRSPTTTTTTARSPARTKPPPPPPLAESFAVV
pt005397_POPTR_ ---SPGVRL--RVNSPRISNKKIQAYNNGRKSVSSTTSSSSRSRRS------LSDSLAVV
                   *.. .*  *.*:**:  .           .  :*:  * :: .      : :*:**:

AT2G30400.1     KRSVDPKKDFRESMIEMIEENNIRASKDLEDLLACYLTLNPKEYHDLIIHVFEQIWLQLT
Sb008935_Sorbi1 KSSRDPRRDFRESMEEMITENGIRTAADLEDLLACYLSLNAAEYHDLIVEVFEHIWVTLS
pt005397_POPTR_ KSSFDPQKDFRESMVEMIVENNIKASKDLEDLLACYLSLNSDEYHDLIIKVFKQIWFDLT
                * * **::****** *** **.*::: **********:**. ******:.**::**. *:

AT2G30400.1     KTK--
Sb008935_Sorbi1 DVKV-
pt005397_POPTR_ DIKLK
                . *
BoxShade v3.31 C (beta, 970507) Output
AT2G30400.1     M G N Y K F R I S E M L P N A W F H K L K D V - - - - - - - - T K H S K P K N K A S S S - - S S N T C S K - K K P S S D
Sb008935_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M T K P A A K - - - - - - -
pt005397_POPTR_    M G N N R F R L S D M M P N A W F Y K L K E M G K T R N H N T T T H S I K K R Q A T S A A E T Q Q P P S K P K H P Q Y N
 
AT2G30400.1     S L P Q H S Y F - S N S L V A N N P P H H N S P R N S L H T - - - - - - - - - - - - K K M S K R K T L Y K P S L K P L T
Sb008935_Sorbi1    - - - - - - - - - - R E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt005397_POPTR_    P Y P R K S Y Y I T R E L I S S E Q I P H T S P R N S K S T Y T N F P D P P R R S S N Q R N R R R T I - K A S P K H V S
 
AT2G30400.1     - - - - - - - - - - - - - - P P P L L V S A S F N K S K I N D Q D S S Y S L F P A I E T S P E S F V Y S F Y E E D D D D
Sb008935_Sorbi1    - - - - - - - - - - - - - - - - P D V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt005397_POPTR_    A G C N C R A T L W T K S D S P P D Y S A S L Y D G S L D Q E T D F S D S F P P E F K S D S A L A T V S F - - - - - - D
 
AT2G30400.1     E F V E F S N - - - - - - - - - - - - - - - F K I N T K N K A F T K Q K V K V I D S - - - V E K A C T A S K P - - - - -
Sb008935_Sorbi1    - - - - - - - - - - C Q L - - - - - - - - - - - V D K H - - - - - - - - - - - - - - - - - I D V L A H A T R - - - - - -
pt005397_POPTR_    K M L S W S S S C D C K L D S I D N D G I V I S V D K K S T A R N L D N P K V F H S I S D L D L P P I V T K P A K F D D
 
AT2G30400.1     - - - - - - - - - - - - - - - - I K K P Q K - - - - - - - S H L S V K I S R D E D - - D N E Y K A E K K Y Q R Q V S S G
Sb008935_Sorbi1    - - - - - - - - - - - - - - - - R A S P - - - - - - - - - - - - - - - V V P E Q S - - - - - - K L - K P P R R S V S S -
pt005397_POPTR_    Q L E D T K K K E T Q E P T K Y R R S P A K Y E E T N A H A S L S V K V V K E E S I A V K E Y K T - S S V R R N S V T -
 
AT2G30400.1     R K P S A G I N L K - R V N S P R I Q L S G - - - - - - - - - - T R R S T S R R S E S K Q D - - - - - - V L E S F A V M
Sb008935_Sorbi1    - - - S S A R R L K T R A N T P R L A S S K - - - - - K C R S P T T T T T T A R S P A R T K P P P P P P L A E S F A V V
pt005397_POPTR_    - - - S P G V R L - - R V N S P R I S N K K I Q A Y N N G R K S V S S T T S S S S R S R R S - - - - - - L S D S L A V V
 
AT2G30400.1     K R S V D P K K D F R E S M I E M I E E N N I R A S K D L E D L L A C Y L T L N P K E Y H D L I I H V F E Q I W L Q L T
Sb008935_Sorbi1    K S S R D P R R D F R E S M E E M I T E N G I R T A A D L E D L L A C Y L S L N A A E Y H D L I V E V F E H I W V T L S
pt005397_POPTR_    K S S F D P Q K D F R E S M V E M I V E N N I K A S K D L E D L L A C Y L S L N S D E Y H D L I I K V F K Q I W F D L T
 
AT2G30400.1     K T K - -
Sb008935_Sorbi1    D V K V -
pt005397_POPTR_    D I K L K
 
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