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| Input | Putative repression domain | ||||
|---|---|---|---|---|---|
| AT2G30420.1 | not found | ||||
| Ortholog | Putative repression domain | Reverse top hit | Relation | Blast score ratio | Type |
| Gm029528 | not found in 79aa | AT5G53200.1 | 1st_not | 0.410480349 | II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT2G30420.1 MDNTNRLRLRRGPSLRQTKFTRSRYDSEEVSSIEWEFISMTEQEEDLISRMYRLVGNRWD
gm029528_Glyma1 --------------MSTTATTTS-----EVSSNEWKVIHMSEQEEDLIRRMYKLVGDKWN
: * * * **** **:.* *:******* ***:***::*:
AT2G30420.1 LIAGRVVGRKANEIERYWIMRNSDYFSHKRRRLNNSPFFSTSPLNLQENLKL
gm029528_Glyma1 LIAGRIPSRKAEEIERFWIMRHGDAFSVKRHR-----------SKAQDS---
*****: .***:****:****:.* ** **:* : *:.
| AT2G30420.1 | M | D | N | T | N | R | L | R | L | R | R | G | P | S | L | R | Q | T | K | F | T | R | S | R | Y | D | S | E | E | V | S | S | I | E | W | E | F | I | S | M | T | E | Q | E | E | D | L | I | S | R | M | Y | R | L | V | G | N | R | W | D |
| gm029528_Glyma1 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | M | S | T | T | A | T | T | T | S | - | - | - | - | - | E | V | S | S | N | E | W | K | V | I | H | M | S | E | Q | E | E | D | L | I | R | R | M | Y | K | L | V | G | D | K | W | N |
| AT2G30420.1 | L | I | A | G | R | V | V | G | R | K | A | N | E | I | E | R | Y | W | I | M | R | N | S | D | Y | F | S | H | K | R | R | R | L | N | N | S | P | F | F | S | T | S | P | L | N | L | Q | E | N | L | K | L | ||||||||
| gm029528_Glyma1 | L | I | A | G | R | I | P | S | R | K | A | E | E | I | E | R | F | W | I | M | R | H | G | D | A | F | S | V | K | R | H | R | - | - | - | - | - | - | - | - | - | - | - | S | K | A | Q | D | S | - | - | - | ||||||||