fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G30424.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt023384 not found in 97aa AT5G53200.1 1st_not 0.497652582 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G30424.1     MDNTNRLRHLRSRKQSKFTLGDTAEVNSVKWEFINMTEQEEDLIFRMHRLVGDRWDLIAG
pt023384_POPTR_ MESMDR-RRRRRRKQAKINNSESEEVSSIEWEFIDMSEQEEDLIYRMYRLVGERWDLIAG
                *:. :* *: * ***:*:. .:: **.*::****:*:*******:**:****:*******

AT2G30424.1     RVVGREAKDIERYWIMRNCDHCSHKRRRVH-----KFYRFSISPP
pt023384_POPTR_ RIPGRKAEEIERFWIMKHREGFAEK-RRLHSKAKSKTYR------
                *: **:*::***:***:: :  :.* **:*     * **
BoxShade v3.31 C (beta, 970507) Output
AT2G30424.1     M D N T N R L R H L R S R K Q S K F T L G D T A E V N S V K W E F I N M T E Q E E D L I F R M H R L V G D R W D L I A G
pt023384_POPTR_    M E S M D R - R R R R R R K Q A K I N N S E S E E V S S I E W E F I D M S E Q E E D L I Y R M Y R L V G E R W D L I A G
 
AT2G30424.1     R V V G R E A K D I E R Y W I M R N C D H C S H K R R R V H - - - - - K F Y R F S I S P P
pt023384_POPTR_    R I P G R K A E E I E R F W I M K H R E G F A E K - R R L H S K A K S K T Y R - - - - - -
 
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