fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G31180.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt001186 not found in 273aa AT3G23250.1 not_not 0.481904761 III
Pt042984 not found in 287aa AT3G23250.1 not_not 0.462857142 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G31180.1     MGRAPCCEKMGVKRGPWTPEEDQILINYIHLYGHSNWRALPKHAGLLRCGKSCRLRWINY
pt042984_POPTR_ MVRAPCCEKMGLKRGPWTPEEDQILISYVQKYGHSNWRALPKQAGLQRCGKSCRLRWVNY
pt001186_POPTR_ MVRAPCCEKMGLKKGPWTAEEDQILINYIQLHGHGNWRALPKQAGLLRCGKSCRLRWINY
                * *********:*:****.*******.*:: :**.*******:*** **********:**

AT2G31180.1     LRPDIKRGNFTPQEEQTIINLHESLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLSKNL
pt042984_POPTR_ LRPDIKRGNFSKEEEEAIIKLHEILGNRWSAIASRLPGRTDNEIKNVWHTHLLKRLKQN-
pt001186_POPTR_ LRPDIKRGNFSREEEDTIIKLHEMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLEKNH
                **********: :**::**:*** *********::***************** ***.:* 

AT2G31180.1     NN---GGDTKDVNGI---NETTNEDKGSVIVDTASL------------------QQFSNS
pt042984_POPTR_ ------GEPKSQQHIRIPDCHLNDNK---LSQSANSTIPSLSGCKSIEYAQISPQPSSSD
pt001186_POPTR_ VTPEIKGRSVDISRF---DHELNTDQE--LLDSSNLAAGS---DQTEEHRPISPQQCSSD
                      * . . . :   :   * ::   : :::.                   *  *..

AT2G31180.1     ITTF----------------DISNDNKDDIMSYEDISALIDDSFWSDVISVDNSN-KNEK
pt042984_POPTR_ HSSVTDTSVTTSETNNTGLIKVEN-----IDSSEIYPVI-DEDFWSEPEMVENSGMPSSN
pt001186_POPTR_ TSSLI-----------TGDIDISNNMCMKIESSDDFPEM-DESFWSEVLSADNS-----R
                 ::.                .:.*     * * :  . : *:.***:   .:**     .

AT2G31180.1     KIEDWEGLIDRNSKKCSY-S------------NSKLYNDDMEFWFDVFTSNRRIEEFSDI
pt042984_POPTR_ FLDD---------SQFPFPSPDTMERAGCYGYGPKVD-DNMEFWYNLFI---KSGGIEEL
pt001186_POPTR_ IVSDFSAIGTEPQLQFPF-SPLVIEVEQVYATNSNMY-DSTEYWHDLFT---RAGGSLDL
                 :.*          : .: *            ..::  *. *:*.::*    :     ::

AT2G31180.1     PEF-------------
pt042984_POPTR_ PVQYLQRYSYLADERI
pt001186_POPTR_ PEI-------------
                *
BoxShade v3.31 C (beta, 970507) Output
AT2G31180.1     M G R A P C C E K M G V K R G P W T P E E D Q I L I N Y I H L Y G H S N W R A L P K H A G L L R C G K S C R L R W I N Y
pt042984_POPTR_    M V R A P C C E K M G L K R G P W T P E E D Q I L I S Y V Q K Y G H S N W R A L P K Q A G L Q R C G K S C R L R W V N Y
pt001186_POPTR_    M V R A P C C E K M G L K K G P W T A E E D Q I L I N Y I Q L H G H G N W R A L P K Q A G L L R C G K S C R L R W I N Y
 
AT2G31180.1     L R P D I K R G N F T P Q E E Q T I I N L H E S L G N R W S A I A A K L P G R T D N E I K N V W H T H L K K R L S K N L
pt042984_POPTR_    L R P D I K R G N F S K E E E E A I I K L H E I L G N R W S A I A S R L P G R T D N E I K N V W H T H L L K R L K Q N -
pt001186_POPTR_    L R P D I K R G N F S R E E E D T I I K L H E M L G N R W S A I A A R L P G R T D N E I K N V W H T H L K K R L E K N H
 
AT2G31180.1     N N - - - G G D T K D V N G I - - - N E T T N E D K G S V I V D T A S L - - - - - - - - - - - - - - - - - - Q Q F S N S
pt042984_POPTR_    - - - - - - G E P K S Q Q H I R I P D C H L N D N K - - - L S Q S A N S T I P S L S G C K S I E Y A Q I S P Q P S S S D
pt001186_POPTR_    V T P E I K G R S V D I S R F - - - D H E L N T D Q E - - L L D S S N L A A G S - - - D Q T E E H R P I S P Q Q C S S D
 
AT2G31180.1     I T T F - - - - - - - - - - - - - - - - D I S N D N K D D I M S Y E D I S A L I D D S F W S D V I S V D N S N - K N E K
pt042984_POPTR_    H S S V T D T S V T T S E T N N T G L I K V E N - - - - - I D S S E I Y P V I - D E D F W S E P E M V E N S G M P S S N
pt001186_POPTR_    T S S L I - - - - - - - - - - - T G D I D I S N N M C M K I E S S D D F P E M - D E S F W S E V L S A D N S - - - - - R
 
AT2G31180.1     K I E D W E G L I D R N S K K C S Y - S - - - - - - - - - - - - N S K L Y N D D M E F W F D V F T S N R R I E E F S D I
pt042984_POPTR_    F L D D - - - - - - - - - S Q F P F P S P D T M E R A G C Y G Y G P K V D - D N M E F W Y N L F I - - - K S G G I E E L
pt001186_POPTR_    I V S D F S A I G T E P Q L Q F P F - S P L V I E V E Q V Y A T N S N M Y - D S T E Y W H D L F T - - - R A G G S L D L
 
AT2G31180.1     P E F - - - - - - - - - - - - -
pt042984_POPTR_    P V Q Y L Q R Y S Y L A D E R I
pt001186_POPTR_    P E I - - - - - - - - - - - - -
 
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