fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G31180.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt040508 not found in 272aa AT2G31180.1 1st_1st 0.487619047 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G31180.1     MGRAPCCEKMGVKRGPWTPEEDQILINYIHLYGHSNWRALPKHAGLLRCGKSCRLRWINY
pt040508_POPTR_ MVRAPCCEKMGLKRGPWTAEEDRILINHIQLYGHGNWRALPKQAGLLRCGKSCRLRWINY
                * *********:******.***:****:*:****.*******:*****************

AT2G31180.1     LRPDIKRGNFTPQEEQTIINLHESLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKRLSKN-
pt040508_POPTR_ LRPDIKRGNFSREEEDTIIKLHEMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLEQNH
                **********: :**:***:*** **********:*********************.:* 

AT2G31180.1     ----LNNGGDTKDVNGINETTNEDKGSVIVDTASL----------------QQFS---NS
pt040508_POPTR_ FAPEIN--GRSVDVSRFNHELK--TGPEIVSSSNVVAAGCDQSKEHRPISPQQCSSDVSS
                    :*  * : **. :*.  :  .*. **.::.:                ** *   .*

AT2G31180.1     ITTFDISNDNKDDIMSYEDISALIDDSFWSDVISVDNSNKNEKKIEDWEG----------
pt040508_POPTR_ VTTVDTSNDMCTKVAESDDFLEM-DEIFWSEVLSADNSS----MMSDYSAISTEPQLQFP
                :**.* ***   .: . :*:  : *: ***:*:*.***.     :.*:..          

AT2G31180.1     ----LIDRNSKKCSYSNSKLYNDDMEFWFDVFTSNRRIEEFSDIPEF
pt040508_POPTR_ FSPLIID--VEQVQATNSNMY-DGMDFWHNLFTRAGELPELTEI---
                    :**   :: . :**::* *.*:**.::**   .: *:::*
BoxShade v3.31 C (beta, 970507) Output
AT2G31180.1     M G R A P C C E K M G V K R G P W T P E E D Q I L I N Y I H L Y G H S N W R A L P K H A G L L R C G K S C R L R W I N Y
pt040508_POPTR_    M V R A P C C E K M G L K R G P W T A E E D R I L I N H I Q L Y G H G N W R A L P K Q A G L L R C G K S C R L R W I N Y
 
AT2G31180.1     L R P D I K R G N F T P Q E E Q T I I N L H E S L G N R W S A I A A K L P G R T D N E I K N V W H T H L K K R L S K N -
pt040508_POPTR_    L R P D I K R G N F S R E E E D T I I K L H E M L G N R W S A I A A R L P G R T D N E I K N V W H T H L K K R L E Q N H
 
AT2G31180.1     - - - - L N N G G D T K D V N G I N E T T N E D K G S V I V D T A S L - - - - - - - - - - - - - - - - Q Q F S - - - N S
pt040508_POPTR_    F A P E I N - - G R S V D V S R F N H E L K - - T G P E I V S S S N V V A A G C D Q S K E H R P I S P Q Q C S S D V S S
 
AT2G31180.1     I T T F D I S N D N K D D I M S Y E D I S A L I D D S F W S D V I S V D N S N K N E K K I E D W E G - - - - - - - - - -
pt040508_POPTR_    V T T V D T S N D M C T K V A E S D D F L E M - D E I F W S E V L S A D N S S - - - - M M S D Y S A I S T E P Q L Q F P
 
AT2G31180.1     - - - - L I D R N S K K C S Y S N S K L Y N D D M E F W F D V F T S N R R I E E F S D I P E F
pt040508_POPTR_    F S P L I I D - - V E Q V Q A T N S N M Y - D G M D F W H N L F T R A G E L P E L T E I - - -
 
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