fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G31230.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm028117 not found in 219aa AT3G23240.1 not_not 0.408450704 III
Gm055291 not found in 214aa AT3G23240.1 not_not 0.405633802 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G31230.1     MEYSQSSMYSSPSSWSSSQESLLWNESCFLDQSSEPQAF----FCPNYDYSDDFFSFESP
gm055291_Glyma2 MD-SPSSFFNSPS-------------SDFSSESSSPEAFSWEGYLP--------FNENDP
gm028117_Glyma1 MD-SPSSFFNSPS-------------SGFCSESSSPEAFSWEGYLP--------FNENDP
                *: * **::.***             * * .:**.*:**    : *        *. :.*

AT2G31230.1     EMMIKEEIQNGDVS------NSEEEEKVGIDEERSYRGVRKRPWGKFAAEIRDSTRNGIR
gm055291_Glyma2 EEMLLYGMIAGATTVDHSFERTSSEESEAARKKKSYRGVRRRPWGKFAAEIRDSTRHGMR
gm028117_Glyma1 EEMLLYGMIAGATTEEHSGERASSEESAAARKEKSYRGVRRRPWGKFAAEIRDSTRHGMR
                * *:   :  * .:      .:..**. .  :::******:***************:*:*

AT2G31230.1     VWLGTFDKAEEAALAYDQAAFATKGSLATLNFPVEVVRESLKKM----ENVNLHDGGSPV
gm055291_Glyma2 VWLGTFDSAEAAALAYDQAAFSMRGSAAILNFPVEIVRESLKEMNYA-NDSNNEEGCSPV
gm028117_Glyma1 VWLGTFDSAEAAALAYDQAAFSMRGSAAILNFPAEIVRESLKEMNYAHDDSNNEEGCSPV
                *******.** **********: :** * ****.*:******:*    :: * .:* ***

AT2G31230.1     MALKRKHSLRNRPRGKKRSSSSSSSSSNSSSCSSSSSTSSTSRSSSKQSVVKQESGTLVV
gm055291_Glyma2 VALKRKHSLRRKISVKK----NNNSKLQSSTVDNA-----------------------VV
gm028117_Glyma1 VALKRKHSLRRKINVRKKKNNNNNSKLQSSTVDNA-----------------------VV
                :*********.:   :*    ...*. :**: ..:                       **

AT2G31230.1     FEDLGAEYLEQLLMSSC-------
gm055291_Glyma2 FEDLGPDYLEQLLMSSDHHIPTTF
gm028117_Glyma1 FEDLGPDYLEQLLMSSDHHIPTTF
                *****.:*********
BoxShade v3.31 C (beta, 970507) Output
AT2G31230.1     M E Y S Q S S M Y S S P S S W S S S Q E S L L W N E S C F L D Q S S E P Q A F - - - - F C P N Y D Y S D D F F S F E S P
gm055291_Glyma2    M D - S P S S F F N S P S - - - - - - - - - - - - - S D F S S E S S S P E A F S W E G Y L P - - - - - - - - F N E N D P
gm028117_Glyma1    M D - S P S S F F N S P S - - - - - - - - - - - - - S G F C S E S S S P E A F S W E G Y L P - - - - - - - - F N E N D P
 
AT2G31230.1     E M M I K E E I Q N G D V S - - - - - - N S E E E E K V G I D E E R S Y R G V R K R P W G K F A A E I R D S T R N G I R
gm055291_Glyma2    E E M L L Y G M I A G A T T V D H S F E R T S S E E S E A A R K K K S Y R G V R R R P W G K F A A E I R D S T R H G M R
gm028117_Glyma1    E E M L L Y G M I A G A T T E E H S G E R A S S E E S A A A R K E K S Y R G V R R R P W G K F A A E I R D S T R H G M R
 
AT2G31230.1     V W L G T F D K A E E A A L A Y D Q A A F A T K G S L A T L N F P V E V V R E S L K K M - - - - E N V N L H D G G S P V
gm055291_Glyma2    V W L G T F D S A E A A A L A Y D Q A A F S M R G S A A I L N F P V E I V R E S L K E M N Y A - N D S N N E E G C S P V
gm028117_Glyma1    V W L G T F D S A E A A A L A Y D Q A A F S M R G S A A I L N F P A E I V R E S L K E M N Y A H D D S N N E E G C S P V
 
AT2G31230.1     M A L K R K H S L R N R P R G K K R S S S S S S S S S N S S S C S S S S S T S S T S R S S S K Q S V V K Q E S G T L V V
gm055291_Glyma2    V A L K R K H S L R R K I S V K K - - - - N N N S K L Q S S T V D N A - - - - - - - - - - - - - - - - - - - - - - - V V
gm028117_Glyma1    V A L K R K H S L R R K I N V R K K K N N N N N S K L Q S S T V D N A - - - - - - - - - - - - - - - - - - - - - - - V V
 
AT2G31230.1     F E D L G A E Y L E Q L L M S S C - - - - - - -
gm055291_Glyma2    F E D L G P D Y L E Q L L M S S D H H I P T T F
gm028117_Glyma1    F E D L G P D Y L E Q L L M S S D H H I P T T F
 
0