fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G31310.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt039807 not found in 223aa AT3G58190.1 1st_not 0.413407821 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G31310.1     MGGLGSPCGGCKFLRRKCVEGCVFAPYFCYEEGSSNFAAIHKVFGASNFSKLISHLPDHD
pt039807_POPTR_ MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGAQHFAAIHKVFGASNVSKLLAHLPVSD
                * * *****.*********.*********:*:*:.:************.***::***  *

AT2G31310.1     RCDAVRTISYEAHSRLHDPIYGCVSQIFSLQQQVVSLQAQVVLLREEASRRFPQDDPGCN
pt039807_POPTR_ RSEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLASLKEQAAQSFLNGSATTN
                *.:*. ******::**:********:**:******.****:. *:*:*:: * :...  *

AT2G31310.1     MKQQEKVLAQ-QMPQDLHNWFH-----------------------QGILDSDFDPMS-GT
pt039807_POPTR_ --PNDKYYGKPSYPQELQSWFHSENSSTVPQLNPNNLTNNMPYCENGIM----DPNSMGN
                   ::*  .: . **:*:.***                       :**:    ** * *.

AT2G31310.1     TRDNERSMDHNESPCSSNESLNYYQEVNFPWSV-----------------
pt039807_POPTR_ YGNSSSSFDSFEEASHSMSSFD-MQTDNLQWTYQHADDLQSMAFGYTQHS
                  :.. *:*  *... * .*::  *  *: *:
BoxShade v3.31 C (beta, 970507) Output
AT2G31310.1     M G G L G S P C G G C K F L R R K C V E G C V F A P Y F C Y E E G S S N F A A I H K V F G A S N F S K L I S H L P D H D
pt039807_POPTR_    M T G S G S P C G A C K F L R R K C V R G C V F A P Y F C H E Q G A Q H F A A I H K V F G A S N V S K L L A H L P V S D
 
AT2G31310.1     R C D A V R T I S Y E A H S R L H D P I Y G C V S Q I F S L Q Q Q V V S L Q A Q V V L L R E E A S R R F P Q D D P G C N
pt039807_POPTR_    R S E A A V T I S Y E A Q A R L Q D P I Y G C V S H I F A L Q Q Q V V N L Q A Q L A S L K E Q A A Q S F L N G S A T T N
 
AT2G31310.1     M K Q Q E K V L A Q - Q M P Q D L H N W F H - - - - - - - - - - - - - - - - - - - - - - - Q G I L D S D F D P M S - G T
pt039807_POPTR_    - - P N D K Y Y G K P S Y P Q E L Q S W F H S E N S S T V P Q L N P N N L T N N M P Y C E N G I M - - - - D P N S M G N
 
AT2G31310.1     T R D N E R S M D H N E S P C S S N E S L N Y Y Q E V N F P W S V - - - - - - - - - - - - - - - - -
pt039807_POPTR_    Y G N S S S S F D S F E E A S H S M S S F D - M Q T D N L Q W T Y Q H A D D L Q S M A F G Y T Q H S
 
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