fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G31380.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt003705 not found in 238aa AT1G06040.1 1st_not 0.602409638 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G31380.1     MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDIC
pt003705_POPTR_ MKIQCDVCEKAPATVICCADEAALCAKCDIEVHAANKLASKHQRLLLQCLSNKLPPCDIC
                **************:**************:***************:*:.**.*:******

AT2G31380.1     LEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTSCNQEVEKNHF
pt003705_POPTR_ QEKAAFIFCVEDRALFCRDCDEPIHSAGSLSANHQRFLATGIRVALSS-SCSKDTQTNSS
                 **************:******. *:..: ****************** **.::.:.*  

AT2G31380.1     DPSNQQSLSKP---PTQQPAAPSPLWATDEFFSYSDLDCSNKEKEQLDLGELDWLAEMGL
pt003705_POPTR_ GPPNQSAQQTPMKIPAQQTSSFATSWAVDDLLQFSEFESSTDKKEQLELGEFEWLADMGL
                .*.**.: ..*   *:**.:: :. **.*:::.:*:::.*..:****:***::***:***

AT2G31380.1     FGDQPDQEALPVAEVPELSFSHLAHAHSYNRPMKSNVPNKKQRLEYRYDDEEEHFLVPDL
pt003705_POPTR_ FGEQLPQEALAAAEVPQLPISPPTNVNSC-RPTKSSMPHKKPRIEIS-DDDDEYLTVPDL
                **:*  ****..****:*.:*  ::.:*  ** **.:*:** *:*   **::*:: ****

AT2G31380.1     G
pt003705_POPTR_ G
                *
BoxShade v3.31 C (beta, 970507) Output
AT2G31380.1     M K I Q C D V C E K A P A T L I C C A D E A A L C A K C D V E V H A A N K L A S K H Q R L F L D S L S T K F P P C D I C
pt003705_POPTR_    M K I Q C D V C E K A P A T V I C C A D E A A L C A K C D I E V H A A N K L A S K H Q R L L L Q C L S N K L P P C D I C
 
AT2G31380.1     L E K A A F I F C V E D R A L L C R D C D E A T H A P N T R S A N H Q R F L A T G I R V A L S S T S C N Q E V E K N H F
pt003705_POPTR_    Q E K A A F I F C V E D R A L F C R D C D E P I H S A G S L S A N H Q R F L A T G I R V A L S S - S C S K D T Q T N S S
 
AT2G31380.1     D P S N Q Q S L S K P - - - P T Q Q P A A P S P L W A T D E F F S Y S D L D C S N K E K E Q L D L G E L D W L A E M G L
pt003705_POPTR_    G P P N Q S A Q Q T P M K I P A Q Q T S S F A T S W A V D D L L Q F S E F E S S T D K K E Q L E L G E F E W L A D M G L
 
AT2G31380.1     F G D Q P D Q E A L P V A E V P E L S F S H L A H A H S Y N R P M K S N V P N K K Q R L E Y R Y D D E E E H F L V P D L
pt003705_POPTR_    F G E Q L P Q E A L A A A E V P Q L P I S P P T N V N S C - R P T K S S M P H K K P R I E I S - D D D D E Y L T V P D L
 
AT2G31380.1     G
pt003705_POPTR_    G
 
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