fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G31730.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os017881 not found in 156aa AT1G05710.3 1st_not 0.467391304 II
Gm019001 not found in 167aa AT1G05710.3 1st_not 0.547101449 II
Pt015028 not found in 143aa AT1G05710.3 1st_not 0.579710144 II
Sm009212 not found in 108aa AT3G19500.1 1st_not 0.442028985 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G31730.1     ----------MEYSRDSA---EMMM-----ETKRN-------------VYSLEDNKI---
pt015028_POPTR_ -----------------------MM-----ENKRS-------------PCSVDHASLTSL
gm019001_Glyma0 MIASSFCNADSMFSREEGIDVRKMM-----EHKRS-------------PCSVDQSSYTSI
Sm009212_Selmo1 -------------------EMEMQM-----------------------------------
Os017881_Os04t0 ----------------------MMMTEVANHSKRNHNESYFTGKAAVTSSSEEFGSMTSK
                                        *                                   

AT2G31730.1     --KRHKSSDLSFSSKERKDKLAERISALQQLVSPYGKTDTASVLLEGMQYIQFLQEQVKV
pt015028_POPTR_ ATKRHK-ADFSISTKERKEKLGERIVALQQLVSPYGKTDTASVLMEAMEYIRFLHEQVQV
gm019001_Glyma0 ASKRQK-ADLSISTKERKEKIGKRIVALQQLVSPYGKTDTSSVLKEAMEYIGFLHKQVKL
Sm009212_Selmo1 --------------QVRKEKLGERISALQQLVSPFGKTDTASVLLEAIGYIKFLHEQVQV
Os017881_Os04t0 KPRNTSPRDAPVSPKEKKDKIGERVAALQQLVSPFGKTDTASVLQEASGYIKFLHQQLEV
                              : :*:*:.:*: ********:*****:*** *.  ** **::*:::

AT2G31730.1     LSAPYLQ--ATPSTTEEEVEEYSLRSKGLCLVPLEYTSEVAQTNGADIWAPVKTPTSSHA
pt015028_POPTR_ LSAPYLQ--GTSTAQMQELGQYSLRNKGLCLVPTSCTAGIARSNGADIWAPIK--SPSPK
gm019001_Glyma0 LSAPYLE--SSPAAKMQGMEPCSLRSRGLCLVPVSFTIGVAETNGADIWAPIKT-TTSPK
Sm009212_Selmo1 LSSPYMK-PAGVSTTTRQTDRQDLRSRGLCLVPVSCTLQVANDNGADYWAPTLH-GLK--
Os017881_Os04t0 LSSPYMRAPPVPGAAPEDPDHYSLRNRGLCLVPVDQTLQLTQSNGADLWAPANT-TRRR-
                **:**:.      :  .     .**.:****** . *  ::. **** ***         

AT2G31730.1     FNLSSSNSPFQ
pt015028_POPTR_ FN--KDVSPFH
gm019001_Glyma0 FE--KDVSQFH
Sm009212_Selmo1 -----------
Os017881_Os04t0 -----------
BoxShade v3.31 C (beta, 970507) Output
AT2G31730.1     - - - - - - - - - - M E Y S R D S A - - - E M M M - - - - - E T K R N - - - - - - - - - - - - - V Y S L E D N K I - - -
pt015028_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - M M - - - - - E N K R S - - - - - - - - - - - - - P C S V D H A S L T S L
gm019001_Glyma0    M I A S S F C N A D S M F S R E E G I D V R K M M - - - - - E H K R S - - - - - - - - - - - - - P C S V D Q S S Y T S I
Sm009212_Selmo1    - - - - - - - - - - - - - - - - - - - E M E M Q M - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Os017881_Os04t0    - - - - - - - - - - - - - - - - - - - - - - M M M T E V A N H S K R N H N E S Y F T G K A A V T S S S E E F G S M T S K
 
AT2G31730.1     - - K R H K S S D L S F S S K E R K D K L A E R I S A L Q Q L V S P Y G K T D T A S V L L E G M Q Y I Q F L Q E Q V K V
pt015028_POPTR_    A T K R H K - A D F S I S T K E R K E K L G E R I V A L Q Q L V S P Y G K T D T A S V L M E A M E Y I R F L H E Q V Q V
gm019001_Glyma0    A S K R Q K - A D L S I S T K E R K E K I G K R I V A L Q Q L V S P Y G K T D T S S V L K E A M E Y I G F L H K Q V K L
Sm009212_Selmo1    - - - - - - - - - - - - - - Q V R K E K L G E R I S A L Q Q L V S P F G K T D T A S V L L E A I G Y I K F L H E Q V Q V
Os017881_Os04t0    K P R N T S P R D A P V S P K E K K D K I G E R V A A L Q Q L V S P F G K T D T A S V L Q E A S G Y I K F L H Q Q L E V
 
AT2G31730.1     L S A P Y L Q - - A T P S T T E E E V E E Y S L R S K G L C L V P L E Y T S E V A Q T N G A D I W A P V K T P T S S H A
pt015028_POPTR_    L S A P Y L Q - - G T S T A Q M Q E L G Q Y S L R N K G L C L V P T S C T A G I A R S N G A D I W A P I K - - S P S P K
gm019001_Glyma0    L S A P Y L E - - S S P A A K M Q G M E P C S L R S R G L C L V P V S F T I G V A E T N G A D I W A P I K T - T T S P K
Sm009212_Selmo1    L S S P Y M K - P A G V S T T T R Q T D R Q D L R S R G L C L V P V S C T L Q V A N D N G A D Y W A P T L H - G L K - -
Os017881_Os04t0    L S S P Y M R A P P V P G A A P E D P D H Y S L R N R G L C L V P V D Q T L Q L T Q S N G A D L W A P A N T - T R R R -
 
AT2G31730.1     F N L S S S N S P F Q
pt015028_POPTR_    F N - - K D V S P F H
gm019001_Glyma0    F E - - K D V S Q F H
Sm009212_Selmo1    - - - - - - - - - - -
Os017881_Os04t0    - - - - - - - - - - -
 
0