fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G31730.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt015028 not found in 143aa AT1G05710.3 1st_not 0.579710144 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G31730.1     MEYSRDSAEMMMETKRNVYSLEDNKI-----KRHKSSDLSFSSKERKDKLAERISALQQL
pt015028_POPTR_ ----------MMENKRSPCSVDHASLTSLATKRHK-ADFSISTKERKEKLGERIVALQQL
                          ***.**.  *::. .:     **** :*:*:*:****:**.*** *****

AT2G31730.1     VSPYGKTDTASVLLEGMQYIQFLQEQVKVLSAPYLQATPSTTEEEVEEYSLRSKGLCLVP
pt015028_POPTR_ VSPYGKTDTASVLMEAMEYIRFLHEQVQVLSAPYLQGTSTAQMQELGQYSLRNKGLCLVP
                *************:*.*:**:**:***:********.*.::  :*: :****.*******

AT2G31730.1     LEYTSEVAQTNGADIWAPVKTPTSSHAFNLSSSNSPFQ
pt015028_POPTR_ TSCTAGIARSNGADIWAPIKSP--SPKFN--KDVSPFH
                 . *: :*::********:*:*  *  **  .. ***:
BoxShade v3.31 C (beta, 970507) Output
AT2G31730.1     M E Y S R D S A E M M M E T K R N V Y S L E D N K I - - - - - K R H K S S D L S F S S K E R K D K L A E R I S A L Q Q L
pt015028_POPTR_    - - - - - - - - - - M M E N K R S P C S V D H A S L T S L A T K R H K - A D F S I S T K E R K E K L G E R I V A L Q Q L
 
AT2G31730.1     V S P Y G K T D T A S V L L E G M Q Y I Q F L Q E Q V K V L S A P Y L Q A T P S T T E E E V E E Y S L R S K G L C L V P
pt015028_POPTR_    V S P Y G K T D T A S V L M E A M E Y I R F L H E Q V Q V L S A P Y L Q G T S T A Q M Q E L G Q Y S L R N K G L C L V P
 
AT2G31730.1     L E Y T S E V A Q T N G A D I W A P V K T P T S S H A F N L S S S N S P F Q
pt015028_POPTR_    T S C T A G I A R S N G A D I W A P I K S P - - S P K F N - - K D V S P F H
 
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