fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G31730.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os017881 not found in 156aa AT1G05710.3 1st_not 0.467391304 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G31730.1     MEYSRDSAEMMM-----ETKRN------------------VYSLEDNKIKRHKSSDLSFS
Os017881_Os04t0 ---------MMMTEVANHSKRNHNESYFTGKAAVTSSSEEFGSMTSKKPRNTSPRDAPVS
                         ***     .:***                  . *: .:* :. .. * ..*

AT2G31730.1     SKERKDKLAERISALQQLVSPYGKTDTASVLLEGMQYIQFLQEQVKVLSAPYLQA--TPS
Os017881_Os04t0 PKEKKDKIGERVAALQQLVSPFGKTDTASVLQEASGYIKFLHQQLEVLSSPYMRAPPVPG
                .**:***:.**::********:********* *.  **:**::*::***:**::*  .*.

AT2G31730.1     TTEEEVEEYSLRSKGLCLVPLEYTSEVAQTNGADIWAPVKTPTSSHAFNLSSSNSPFQ
Os017881_Os04t0 AAPEDPDHYSLRNRGLCLVPVDQTLQLTQSNGADLWAPANTTRRR-------------
                :: *: :.****.:******:: * :::*:****:***.:*.
BoxShade v3.31 C (beta, 970507) Output
AT2G31730.1     M E Y S R D S A E M M M - - - - - E T K R N - - - - - - - - - - - - - - - - - - V Y S L E D N K I K R H K S S D L S F S
Os017881_Os04t0    - - - - - - - - - M M M T E V A N H S K R N H N E S Y F T G K A A V T S S S E E F G S M T S K K P R N T S P R D A P V S
 
AT2G31730.1     S K E R K D K L A E R I S A L Q Q L V S P Y G K T D T A S V L L E G M Q Y I Q F L Q E Q V K V L S A P Y L Q A - - T P S
Os017881_Os04t0    P K E K K D K I G E R V A A L Q Q L V S P F G K T D T A S V L Q E A S G Y I K F L H Q Q L E V L S S P Y M R A P P V P G
 
AT2G31730.1     T T E E E V E E Y S L R S K G L C L V P L E Y T S E V A Q T N G A D I W A P V K T P T S S H A F N L S S S N S P F Q
Os017881_Os04t0    A A P E D P D H Y S L R N R G L C L V P V D Q T L Q L T Q S N G A D L W A P A N T T R R R - - - - - - - - - - - - -
 
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