fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G31730.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm019001 not found in 167aa AT1G05710.3 1st_not 0.547101449 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G31730.1     ----------MEYSRDSA---EMMMETKRNVYSLEDNKI-----KRHKSSDLSFSSKERK
gm019001_Glyma0 MIASSFCNADSMFSREEGIDVRKMMEHKRSPCSVDQSSYTSIASKRQK-ADLSISTKERK
                            :**:..   . *** **.  *:::..      **:* :***:*:****

AT2G31730.1     DKLAERISALQQLVSPYGKTDTASVLLEGMQYIQFLQEQVKVLSAPYLQATPSTTEEEVE
gm019001_Glyma0 EKIGKRIVALQQLVSPYGKTDTSSVLKEAMEYIGFLHKQVKLLSAPYLESSPAAKMQGME
                :*:.:** **************:*** *.*:** **::***:******:::*::. : :*

AT2G31730.1     EYSLRSKGLCLVPLEYTSEVAQTNGADIWAPVKTPTSSHAFNLSSSNSPFQ
gm019001_Glyma0 PCSLRSRGLCLVPVSFTIGVAETNGADIWAPIKTTTSP---KFEKDVSQFH
                  ****:******:.:*  **:*********:**.**.   ::... * *:
BoxShade v3.31 C (beta, 970507) Output
AT2G31730.1     - - - - - - - - - - M E Y S R D S A - - - E M M M E T K R N V Y S L E D N K I - - - - - K R H K S S D L S F S S K E R K
gm019001_Glyma0    M I A S S F C N A D S M F S R E E G I D V R K M M E H K R S P C S V D Q S S Y T S I A S K R Q K - A D L S I S T K E R K
 
AT2G31730.1     D K L A E R I S A L Q Q L V S P Y G K T D T A S V L L E G M Q Y I Q F L Q E Q V K V L S A P Y L Q A T P S T T E E E V E
gm019001_Glyma0    E K I G K R I V A L Q Q L V S P Y G K T D T S S V L K E A M E Y I G F L H K Q V K L L S A P Y L E S S P A A K M Q G M E
 
AT2G31730.1     E Y S L R S K G L C L V P L E Y T S E V A Q T N G A D I W A P V K T P T S S H A F N L S S S N S P F Q
gm019001_Glyma0    P C S L R S R G L C L V P V S F T I G V A E T N G A D I W A P I K T T T S P - - - K F E K D V S Q F H
 
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