fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G31730.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm003956 not found in 167aa AT1G05710.3 not_not 0.543478260 III
Gm003958 not found in 165aa AT1G05710.3 not_not 0.514492753 III
Gm028902 not found in 281aa AT3G19500.1 not_not 0.402173913 III
Gm028903 not found in 278aa AT3G19500.1 not_not 0.402173913 III
Get sequence file
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G31730.1     ------------------------------------------MEYS--------------
gm028903_Glyma1 MEAKKEYEVDHLSTPTGTSFSQLLFGDDDDDVDESALGLAVDQSYSYNYNNLTRSPLFSI
gm003956_Glyma0 --------------MIASSFCN------------------ADSMFS--------------
gm003958_Glyma0 --------------MIASSFCN------------------ADSMFS--------------
gm028902_Glyma1 MEAKKEYEVDHLSTPTGTSFSQLLFGDDDDDVDESALGLAVDQSYSYNYNNLTRSPLFSI
                                                            :*              

AT2G31730.1     -------------RDSA-----EMMMETKRNVYSLEDNKI--------------------
gm028903_Glyma1 HKAPQMLCFGNHQNEEGGVLLPETNVTPQKSVITSSDSSSASASSCNHTNTAFNSLPKSN
gm003956_Glyma0 -------------REEG--IDVRKMMEHKRRPCSVDQSSYTSIA----------------
gm003958_Glyma0 -------------REEG--IDVRKMMEHKRRPCSVDQSSYTSIA----------------
gm028902_Glyma1 HKAPQMLCFGNHQNEEGGVLLPETNVTPQKSVITSSDSSSASASSCNHTNTAFNSLPKSN
                             .:..     .  :  ::   : .:..                     

AT2G31730.1     -----KRHKS-SDLSFSSK-----------------ERKDKLAERISALQQLVSPYGKTD
gm028903_Glyma1 N---KKRQEGVAKVGVGSQRQTKKNKAENPTSTGHAKRKEKLGERIATLQQLVSPFGKTD
gm003956_Glyma0 ----SKRQK--ADLSISTK-----------------ERKEKIGERIVALQQLVSPYGKTD
gm003958_Glyma0 ----SKRQK--ADLSISTK-----------------ERKEKIGERIVALQQLVSPYGKTD
gm028902_Glyma1 NSLQKKRQEGVAKVGVGSQRQTKKNKAENPTSTGHAKRKEKLGERIATLQQLVSPFGKTD
                     **::  :.:...::                 :**:*:.*** :*******:****

AT2G31730.1     TASVLLEGMQYIQFLQEQVKVLSAPYLQATPST-----------TEEEVEEYSLRSKGLC
gm028903_Glyma1 TASVLHEAMGYIRFLHDQVQVLCSPYLQSLPSSYHQNQHGGGGNNEEEVNK-DLRSKGLC
gm003956_Glyma0 TSSVLKEAMEYIGFLHKQVKLLSAPYLESSPAA-----------KMQGVEPCSLRSRGLC
gm003958_Glyma0 TSSVLKEAMEYIGFLHKQ--LLSAPYLESSPAA-----------KMQGVEPCSLRSRGLC
gm028902_Glyma1 TASVLHEAMGYIRFLHDQVQVLCSPYLQSLPSSYHQNQHGGGGNNEEEVNK-DLRSKGLC
                *:*** *.* ** **:.*  :*.:***:: *::           . : *:  .***:***

AT2G31730.1     LVPLEYTSEVAQTNGADIWAPVKTPTSSHAFNLSSSNSPFQ--
gm028903_Glyma1 LIPVGCTVHVAGSNGADFWSSAAIGNNV-SFTISQAVKRNQDQ
gm003956_Glyma0 LVPVSVTIGVAESNGADIWAPIKTTTSP---KFEKDVSQFH--
gm003958_Glyma0 LVPVSVTIGVAESNGADIWAPIKTTTSP---KFEKDVSQFH--
gm028902_Glyma1 LIPVGCTVHVAGSNGADFWSSAAIGNNV-SFTISQAVKRNQDQ
                *:*:  *  ** :****:*:.    ..    .:..  .  :
BoxShade v3.31 C (beta, 970507) Output
AT2G31730.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E Y S - - - - - - - - - - - - - -
gm028903_Glyma1    M E A K K E Y E V D H L S T P T G T S F S Q L L F G D D D D D V D E S A L G L A V D Q S Y S Y N Y N N L T R S P L F S I
gm003956_Glyma0    - - - - - - - - - - - - - - M I A S S F C N - - - - - - - - - - - - - - - - - - A D S M F S - - - - - - - - - - - - - -
gm003958_Glyma0    - - - - - - - - - - - - - - M I A S S F C N - - - - - - - - - - - - - - - - - - A D S M F S - - - - - - - - - - - - - -
gm028902_Glyma1    M E A K K E Y E V D H L S T P T G T S F S Q L L F G D D D D D V D E S A L G L A V D Q S Y S Y N Y N N L T R S P L F S I
 
AT2G31730.1     - - - - - - - - - - - - - R D S A - - - - - E M M M E T K R N V Y S L E D N K I - - - - - - - - - - - - - - - - - - - -
gm028903_Glyma1    H K A P Q M L C F G N H Q N E E G G V L L P E T N V T P Q K S V I T S S D S S S A S A S S C N H T N T A F N S L P K S N
gm003956_Glyma0    - - - - - - - - - - - - - R E E G - - I D V R K M M E H K R R P C S V D Q S S Y T S I A - - - - - - - - - - - - - - - -
gm003958_Glyma0    - - - - - - - - - - - - - R E E G - - I D V R K M M E H K R R P C S V D Q S S Y T S I A - - - - - - - - - - - - - - - -
gm028902_Glyma1    H K A P Q M L C F G N H Q N E E G G V L L P E T N V T P Q K S V I T S S D S S S A S A S S C N H T N T A F N S L P K S N
 
AT2G31730.1     - - - - - K R H K S - S D L S F S S K - - - - - - - - - - - - - - - - - E R K D K L A E R I S A L Q Q L V S P Y G K T D
gm028903_Glyma1    N - - - K K R Q E G V A K V G V G S Q R Q T K K N K A E N P T S T G H A K R K E K L G E R I A T L Q Q L V S P F G K T D
gm003956_Glyma0    - - - - S K R Q K - - A D L S I S T K - - - - - - - - - - - - - - - - - E R K E K I G E R I V A L Q Q L V S P Y G K T D
gm003958_Glyma0    - - - - S K R Q K - - A D L S I S T K - - - - - - - - - - - - - - - - - E R K E K I G E R I V A L Q Q L V S P Y G K T D
gm028902_Glyma1    N S L Q K K R Q E G V A K V G V G S Q R Q T K K N K A E N P T S T G H A K R K E K L G E R I A T L Q Q L V S P F G K T D
 
AT2G31730.1     T A S V L L E G M Q Y I Q F L Q E Q V K V L S A P Y L Q A T P S T - - - - - - - - - - - T E E E V E E Y S L R S K G L C
gm028903_Glyma1    T A S V L H E A M G Y I R F L H D Q V Q V L C S P Y L Q S L P S S Y H Q N Q H G G G G N N E E E V N K - D L R S K G L C
gm003956_Glyma0    T S S V L K E A M E Y I G F L H K Q V K L L S A P Y L E S S P A A - - - - - - - - - - - K M Q G V E P C S L R S R G L C
gm003958_Glyma0    T S S V L K E A M E Y I G F L H K Q - - L L S A P Y L E S S P A A - - - - - - - - - - - K M Q G V E P C S L R S R G L C
gm028902_Glyma1    T A S V L H E A M G Y I R F L H D Q V Q V L C S P Y L Q S L P S S Y H Q N Q H G G G G N N E E E V N K - D L R S K G L C
 
AT2G31730.1     L V P L E Y T S E V A Q T N G A D I W A P V K T P T S S H A F N L S S S N S P F Q - -
gm028903_Glyma1    L I P V G C T V H V A G S N G A D F W S S A A I G N N V - S F T I S Q A V K R N Q D Q
gm003956_Glyma0    L V P V S V T I G V A E S N G A D I W A P I K T T T S P - - - K F E K D V S Q F H - -
gm003958_Glyma0    L V P V S V T I G V A E S N G A D I W A P I K T T T S P - - - K F E K D V S Q F H - -
gm028902_Glyma1    L I P V G C T V H V A G S N G A D F W S S A A I G N N V - S F T I S Q A V K R N Q D Q
 
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