fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G33310.1 GKGESELELGLGLSLG at 12/246 in AT2G33310.1
GKGESELELGLGLSLG at 12/247 in AT2G33310.2
GKGESELELGLGLSLG at 12/246 in AT2G33310.3
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041570 YPVEAELELGLSLGSG in 43/282 AT2G33310.3 1st_not 0.642276422 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G33310.1     -----------------------MITELEMGKGES-----ELELGLGLSLGGGTAAKIGK
pt041570_POPTR_ MMAGGLGSLGGGGGSSGASTNDSTMSKVEVVEAEASSYPVEAELELGLSLGSG-----GR
                                        ::::*: :.*:     * ** ******.*     *:

AT2G33310.1     SGGGG------AWGERGRLLTAKDFPSVGSKRAADSASHAGSSPPRSSQVVGWPPIGSHR
pt041570_POPTR_ GGGGGGKGKANARGERGRILTAKDFPSV---RAADSVSHEGGSPTAGSQVVGWPPIRAYR
                .****      * *****:*********   *****.** *.**. .********* ::*

AT2G33310.1     MNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKV----------NGKVQVGFIKVNMD
pt041570_POPTR_ MNSLVNQ--AKAARAEEDKGIGE-KDISKDNLKKKICNGNKTSAPSNEKGHLGFVKVNMD
                ******:  :*:** **: *  : ** . .::.**:          * * ::**:*****

AT2G33310.1     GVAIGRKVDLNAHSSYENLAQTLEDMFFR--TNPGTV-GLTSQFTKPLRLLDGSSEFVLT
pt041570_POPTR_ GIPIGRKVDLNAHACYETLAQALEEMFFRSATTINSIGGEKRQVTKPSKLLDGLSEFLLT
                *:.**********:.**.***:**:****  *. .:: * . *.*** :**** ***:**

AT2G33310.1     YEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEPNERQRKQPV
pt041570_POPTR_ YEDKEGDWMLVGDVPWGMFLNSVKRLRIMRTSEANGLAPRFQDRNEKQRIKPV
                **************** **:*******:*:********.* *: **:** :**
BoxShade v3.31 C (beta, 970507) Output
AT2G33310.1     - - - - - - - - - - - - - - - - - - - - - - - M I T E L E M G K G E S - - - - - E L E L G L G L S L G G G T A A K I G K
pt041570_POPTR_    M M A G G L G S L G G G G G S S G A S T N D S T M S K V E V V E A E A S S Y P V E A E L E L G L S L G S G - - - - - G R
 
AT2G33310.1     S G G G G - - - - - - A W G E R G R L L T A K D F P S V G S K R A A D S A S H A G S S P P R S S Q V V G W P P I G S H R
pt041570_POPTR_    G G G G G G K G K A N A R G E R G R I L T A K D F P S V - - - R A A D S V S H E G G S P T A G S Q V V G W P P I R A Y R
 
AT2G33310.1     M N S L V N N Q A T K S A R E E E E A G K K K V K D D E P K D V T K K V - - - - - - - - - - N G K V Q V G F I K V N M D
pt041570_POPTR_    M N S L V N Q - - A K A A R A E E D K G I G E - K D I S K D N L K K K I C N G N K T S A P S N E K G H L G F V K V N M D
 
AT2G33310.1     G V A I G R K V D L N A H S S Y E N L A Q T L E D M F F R - - T N P G T V - G L T S Q F T K P L R L L D G S S E F V L T
pt041570_POPTR_    G I P I G R K V D L N A H A C Y E T L A Q A L E E M F F R S A T T I N S I G G E K R Q V T K P S K L L D G L S E F L L T
 
AT2G33310.1     Y E D K E G D W M L V G D V P W R M F I N S V K R L R V M K T S E A N G L A A R N Q E P N E R Q R K Q P V
pt041570_POPTR_    Y E D K E G D W M L V G D V P W G M F L N S V K R L R I M R T S E A N G L A P R F Q D R N E K Q R I K P V
 
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