fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G33310.1 GKGESELELGLGLSLG at 12/246 in AT2G33310.1
GKGESELELGLGLSLG at 12/247 in AT2G33310.2
GKGESELELGLGLSLG at 12/246 in AT2G33310.3
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt034336 YPVEAELELGLGLSLG in 42/277 AT2G33310.3 not_not 0.639566395 III
Pt034335 YPVEAELELGLGLSLG in 42/303 AT2G33310.3 not_not 0.631436314 III
Pt040421 SPDEGELELGLGLSLG in 39/290 AT4G28640.2 not_not 0.460704607 III
Pt040422 SPDEGELELGLGLSLG in 39/289 AT4G28640.1 not_not 0.455284552 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G33310.1     ----------------------MITELE--MGKG-------ESELELGLGLSLGGGTAAK
pt034336_POPTR_ MMEGCLGLLGGGGSSGASTNKSTLSKVE--VIEAEASSYPVEAELELGLGLSLGSGGGGK
pt040421_POPTR_ -MQG--GFLGGG--SGGSVCMSTVSMEDNVLMSSEDSSSPDEGELELGLGLSLGGASGFK
pt034335_POPTR_ MMEGCLGLLGGGGSSGASTNKSTLSKVE--VIEAEASSYPVEAELELGLGLSLGSGGGGK
pt040422_POPTR_ -MQG--GFLGGG--SGGSVCMSTVSMEDNVLMSSEDSSSPDEGELELGLGLSLGGASGFK
                                       ::  :  : ..       *.***********.. . *

AT2G33310.1     IGKSGGGGAWGERGRLLTAKDFPSV-------------------------GSKRAADSAS
pt034336_POPTR_ ----GKANAWGECGRILTAKDFPSV----------------------------RAADSVS
pt040421_POPTR_ ---DFGQRSSQQYARILTAKDLPSKVSSSSCCSSTTSSSSSTLSRANATAGTKRAADSVS
pt034335_POPTR_ ----GKANAWGECGRILTAKDFPSVVSQPQRPNNNNSMPSTCV--VGAVSGTKRAADSVS
pt040422_POPTR_ ---DFGQRSSQQYARILTAKDLPSKVSSSSCCSSTTSSSSSTLSRANATAGTKRAADSVS
                        :  : .*:*****:**                             *****.*

AT2G33310.1     HAGSSPPRSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKV--
pt034336_POPTR_ HEGGSPTAGSQVVGWPPIRAYRMNSLVSQ--AKAARAEEEKGIGE-KDKSKENLKKKICN
pt040421_POPTR_ ASNGAA--SSQVVGWPPIRSHRMHIMVNQ--AKSQATEEFNSMNK----RKNAVEEKV--
pt034335_POPTR_ HEGGSPTAGSQVVGWPPIRAYRMNSLVSQ--AKAARAEEEKGIGE-KDKSKENLKKKICN
pt040422_POPTR_ ASNGAA---SQVVGWPPIRSHRMHIMVNQ--AKSQATEEFNSMNK----RKNAVEEKV--
                  ..:.   ********* ::**: :*.:  :*:   **  .  :      : : :*:  

AT2G33310.1     --------NGKVQVG-FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFR--TNPGTV
pt034336_POPTR_ GNKTNATGNEKGHLG-FVKVNMDGVPIGRKVDLNAHACYETLAQALEEMFFRSTTTINSI
pt040421_POPTR_ GNKNINIGNTKTRTSLFVKVNMDGTLIGRKVDLNAHGCYETLAQALENMFLRTTTTLNMA
pt034335_POPTR_ GNKTNATGNEKGHLG-FVKVNMDGVPIGRKVDLNAHACYETLAQALEEMFFRSTTTINSI
pt040422_POPTR_ GNKNINIGNTKTRTSLFVKVNMDGTLIGRKVDLNAHGCYETLAQALENMFLRTTTTLNMA
                        * * : . *:******. **********..**.***:**:**:*  *. .  

AT2G33310.1     GLTSQFTKP-------LRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKT
pt034336_POPTR_ GGQKPLSKF-------SKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRT
pt040421_POPTR_ RLSTPEHKIMIDAKRHSQLLGGSSEFVLTYEDKDGDWMLVGDVPWGMFISSVKRLRIMRM
pt034335_POPTR_ GGQKPLSKF-------SKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIMRT
pt040422_POPTR_ RLSTPEHKIMIDAKRHSQLLGGSSEFVLTYEDKDGDWMLVGDVPWGMFISSVKRLRIMRM
                   .   *         :**.************:*********** **:.******:*: 

AT2G33310.1     SEANGLAARNQEPNERQRKQPV
pt034336_POPTR_ SEANGLAPRLQDRNEKQRSKPV
pt040421_POPTR_ SEATGLGK--------------
pt034335_POPTR_ SEANGLAPRLQDRNEKQRSKPV
pt040422_POPTR_ SEATGLGK--------------
                ***.**.
BoxShade v3.31 C (beta, 970507) Output
AT2G33310.1     - - - - - - - - - - - - - - - - - - - - - - M I T E L E - - M G K G - - - - - - - E S E L E L G L G L S L G G G T A A K
pt034336_POPTR_    M M E G C L G L L G G G G S S G A S T N K S T L S K V E - - V I E A E A S S Y P V E A E L E L G L G L S L G S G G G G K
pt040421_POPTR_    - M Q G - - G F L G G G - - S G G S V C M S T V S M E D N V L M S S E D S S S P D E G E L E L G L G L S L G G A S G F K
pt034335_POPTR_    M M E G C L G L L G G G G S S G A S T N K S T L S K V E - - V I E A E A S S Y P V E A E L E L G L G L S L G S G G G G K
pt040422_POPTR_    - M Q G - - G F L G G G - - S G G S V C M S T V S M E D N V L M S S E D S S S P D E G E L E L G L G L S L G G A S G F K
 
AT2G33310.1     I G K S G G G G A W G E R G R L L T A K D F P S V - - - - - - - - - - - - - - - - - - - - - - - - - G S K R A A D S A S
pt034336_POPTR_    - - - - G K A N A W G E C G R I L T A K D F P S V - - - - - - - - - - - - - - - - - - - - - - - - - - - - R A A D S V S
pt040421_POPTR_    - - - D F G Q R S S Q Q Y A R I L T A K D L P S K V S S S S C C S S T T S S S S S T L S R A N A T A G T K R A A D S V S
pt034335_POPTR_    - - - - G K A N A W G E C G R I L T A K D F P S V V S Q P Q R P N N N N S M P S T C V - - V G A V S G T K R A A D S V S
pt040422_POPTR_    - - - D F G Q R S S Q Q Y A R I L T A K D L P S K V S S S S C C S S T T S S S S S T L S R A N A T A G T K R A A D S V S
 
AT2G33310.1     H A G S S P P R S S Q V V G W P P I G S H R M N S L V N N Q A T K S A R E E E E A G K K K V K D D E P K D V T K K V - -
pt034336_POPTR_    H E G G S P T A G S Q V V G W P P I R A Y R M N S L V S Q - - A K A A R A E E E K G I G E - K D K S K E N L K K K I C N
pt040421_POPTR_    A S N G A A - - S S Q V V G W P P I R S H R M H I M V N Q - - A K S Q A T E E F N S M N K - - - - R K N A V E E K V - -
pt034335_POPTR_    H E G G S P T A G S Q V V G W P P I R A Y R M N S L V S Q - - A K A A R A E E E K G I G E - K D K S K E N L K K K I C N
pt040422_POPTR_    A S N G A A - - - S Q V V G W P P I R S H R M H I M V N Q - - A K S Q A T E E F N S M N K - - - - R K N A V E E K V - -
 
AT2G33310.1     - - - - - - - - N G K V Q V G - F I K V N M D G V A I G R K V D L N A H S S Y E N L A Q T L E D M F F R - - T N P G T V
pt034336_POPTR_    G N K T N A T G N E K G H L G - F V K V N M D G V P I G R K V D L N A H A C Y E T L A Q A L E E M F F R S T T T I N S I
pt040421_POPTR_    G N K N I N I G N T K T R T S L F V K V N M D G T L I G R K V D L N A H G C Y E T L A Q A L E N M F L R T T T T L N M A
pt034335_POPTR_    G N K T N A T G N E K G H L G - F V K V N M D G V P I G R K V D L N A H A C Y E T L A Q A L E E M F F R S T T T I N S I
pt040422_POPTR_    G N K N I N I G N T K T R T S L F V K V N M D G T L I G R K V D L N A H G C Y E T L A Q A L E N M F L R T T T T L N M A
 
AT2G33310.1     G L T S Q F T K P - - - - - - - L R L L D G S S E F V L T Y E D K E G D W M L V G D V P W R M F I N S V K R L R V M K T
pt034336_POPTR_    G G Q K P L S K F - - - - - - - S K L L D G S S E F V L T Y E D K E G D W M L V G D V P W G M F L T S V K R L R I M R T
pt040421_POPTR_    R L S T P E H K I M I D A K R H S Q L L G G S S E F V L T Y E D K D G D W M L V G D V P W G M F I S S V K R L R I M R M
pt034335_POPTR_    G G Q K P L S K F - - - - - - - S K L L D G S S E F V L T Y E D K E G D W M L V G D V P W G M F L T S V K R L R I M R T
pt040422_POPTR_    R L S T P E H K I M I D A K R H S Q L L G G S S E F V L T Y E D K D G D W M L V G D V P W G M F I S S V K R L R I M R M
 
AT2G33310.1     S E A N G L A A R N Q E P N E R Q R K Q P V
pt034336_POPTR_    S E A N G L A P R L Q D R N E K Q R S K P V
pt040421_POPTR_    S E A T G L G K - - - - - - - - - - - - - -
pt034335_POPTR_    S E A N G L A P R L Q D R N E K Q R S K P V
pt040422_POPTR_    S E A T G L G K - - - - - - - - - - - - - -
 
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