fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G33310.1 GKGESELELGLGLSLG at 12/246 in AT2G33310.1
GKGESELELGLGLSLG at 12/247 in AT2G33310.2
GKGESELELGLGLSLG at 12/246 in AT2G33310.3
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041570 YPVEAELELGLSLGSG in 43/282 AT2G33310.3 1st_not 0.642276422 II
Pt034336 YPVEAELELGLGLSLG in 42/277 AT2G33310.3 not_not 0.639566395 III
Pt034335 YPVEAELELGLGLSLG in 42/303 AT2G33310.3 not_not 0.631436314 III
Pt040421 SPDEGELELGLGLSLG in 39/290 AT4G28640.2 not_not 0.460704607 III
Pt040422 SPDEGELELGLGLSLG in 39/289 AT4G28640.1 not_not 0.455284552 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G33310.1     -----------------------MITELEMGKG-------ESELELGLGL---SLGGGTA
pt041570_POPTR_ MMAGGLGSLGGGGGSSGASTNDSTMSKVEVVEAEASSYPVEAELELGLSLGSGGRGGGGG
pt040422_POPTR_ MQGGFLG--GGSGGSVCMSTV--SMEDNVLMSSEDSSSPDEGELELGLGL---SLGGASG
pt034335_POPTR_ MMEGCLGLL-GGGGSSGASTNKSTLSKVEVIEAEASSYPVEAELELGLGL---SLGSGGG
pt034336_POPTR_ MMEGCLGLL-GGGGSSGASTNKSTLSKVEVIEAEASSYPVEAELELGLGL---SLGSGGG
pt040421_POPTR_ MQGGFLG--GGSGGSVCMSTV--SMEDNVLMSSEDSSSPDEGELELGLGL---SLGGASG
                                        : .  : ..       *.******.*   . *.. .

AT2G33310.1     AKIGKSGGGGAWGERGRLLTAKDFPSV-------------------------GSKRAADS
pt041570_POPTR_ GK----GKANARGERGRILTAKDFPSV----------------------------RAADS
pt040422_POPTR_ FK---DFGQRSSQQYARILTAKDLPSKVSSSSCCSSTTSSSSSTLSRANATAGTKRAADS
pt034335_POPTR_ GK----GKANAWGECGRILTAKDFPSVVSQPQRPNNNNSMPSTCV--VGAVSGTKRAADS
pt034336_POPTR_ GK----GKANAWGECGRILTAKDFPSV----------------------------RAADS
pt040421_POPTR_ FK---DFGQRSSQQYARILTAKDLPSKVSSSSCCSSTTSSSSSTLSRANATAGTKRAADS
                 *        :  : .*:*****:**                             *****

AT2G33310.1     ASHAGSSPPRSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTKKV
pt041570_POPTR_ VSHEGGSPTAGSQVVGWPPIRAYRMNSLVNQ--AKAARAEEDKGIGE-KDISKDNLKKKI
pt040422_POPTR_ VSASNGA--A-SQVVGWPPIRSHRMHIMVNQ--AKSQATEEFNSMNK----RKNAVEEKV
pt034335_POPTR_ VSHEGGSPTAGSQVVGWPPIRAYRMNSLVSQ--AKAARAEEEKGIGE-KDKSKENLKKKI
pt034336_POPTR_ VSHEGGSPTAGSQVVGWPPIRAYRMNSLVSQ--AKAARAEEEKGIGE-KDKSKENLKKKI
pt040421_POPTR_ VSASNGA--ASSQVVGWPPIRSHRMHIMVNQ--AKSQATEEFNSMNK----RKNAVEEKV
                .*  ..:    ********* ::**: :*.:  :*:   **  .  :      . : :*:

AT2G33310.1     ----------NGKVQVG-FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFR--TNPG
pt041570_POPTR_ CNGNKTSAPSNEKGHLG-FVKVNMDGIPIGRKVDLNAHACYETLAQALEEMFFRSATTIN
pt040422_POPTR_ --GNKNINIGNTKTRTSLFVKVNMDGTLIGRKVDLNAHGCYETLAQALENMFLRTTTTLN
pt034335_POPTR_ CNGNKTNATGNEKGHLG-FVKVNMDGVPIGRKVDLNAHACYETLAQALEEMFFRSTTTIN
pt034336_POPTR_ CNGNKTNATGNEKGHLG-FVKVNMDGVPIGRKVDLNAHACYETLAQALEEMFFRSTTTIN
pt040421_POPTR_ --GNKNINIGNTKTRTSLFVKVNMDGTLIGRKVDLNAHGCYETLAQALENMFLRTTTTLN
                          * * : . *:******  **********..**.***:**:**:*  *. .

AT2G33310.1     TVGLTS-------QFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVM
pt041570_POPTR_ SIGGEKR------QVTKPSKLLDGLSEFLLTYEDKEGDWMLVGDVPWGMFLNSVKRLRIM
pt040422_POPTR_ MARLSTPEHKIMIDAKRHSQLLGGSSEFVLTYEDKDGDWMLVGDVPWGMFISSVKRLRIM
pt034335_POPTR_ SIGGQK-------PLSKFSKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIM
pt034336_POPTR_ SIGGQK-------PLSKFSKLLDGSSEFVLTYEDKEGDWMLVGDVPWGMFLTSVKRLRIM
pt040421_POPTR_ MARLSTPEHKIMIDAKRHSQLLGGSSEFVLTYEDKDGDWMLVGDVPWGMFISSVKRLRIM
                     .         .:  :**.* ***:******:*********** **:.******:*

AT2G33310.1     KTSEANGLAARNQEPNERQRKQPV
pt041570_POPTR_ RTSEANGLAPRFQDRNEKQRIKPV
pt040422_POPTR_ RMSEATGLGK--------------
pt034335_POPTR_ RTSEANGLAPRLQDRNEKQRSKPV
pt034336_POPTR_ RTSEANGLAPRLQDRNEKQRSKPV
pt040421_POPTR_ RMSEATGLGK--------------
                : ***.**.
BoxShade v3.31 C (beta, 970507) Output
AT2G33310.1     - - - - - - - - - - - - - - - - - - - - - - - M I T E L E M G K G - - - - - - - E S E L E L G L G L - - - S L G G G T A
pt041570_POPTR_    M M A G G L G S L G G G G G S S G A S T N D S T M S K V E V V E A E A S S Y P V E A E L E L G L S L G S G G R G G G G G
pt040422_POPTR_    M Q G G F L G - - G G S G G S V C M S T V - - S M E D N V L M S S E D S S S P D E G E L E L G L G L - - - S L G G A S G
pt034335_POPTR_    M M E G C L G L L - G G G G S S G A S T N K S T L S K V E V I E A E A S S Y P V E A E L E L G L G L - - - S L G S G G G
pt034336_POPTR_    M M E G C L G L L - G G G G S S G A S T N K S T L S K V E V I E A E A S S Y P V E A E L E L G L G L - - - S L G S G G G
pt040421_POPTR_    M Q G G F L G - - G G S G G S V C M S T V - - S M E D N V L M S S E D S S S P D E G E L E L G L G L - - - S L G G A S G
 
AT2G33310.1     A K I G K S G G G G A W G E R G R L L T A K D F P S V - - - - - - - - - - - - - - - - - - - - - - - - - G S K R A A D S
pt041570_POPTR_    G K - - - - G K A N A R G E R G R I L T A K D F P S V - - - - - - - - - - - - - - - - - - - - - - - - - - - - R A A D S
pt040422_POPTR_    F K - - - D F G Q R S S Q Q Y A R I L T A K D L P S K V S S S S C C S S T T S S S S S T L S R A N A T A G T K R A A D S
pt034335_POPTR_    G K - - - - G K A N A W G E C G R I L T A K D F P S V V S Q P Q R P N N N N S M P S T C V - - V G A V S G T K R A A D S
pt034336_POPTR_    G K - - - - G K A N A W G E C G R I L T A K D F P S V - - - - - - - - - - - - - - - - - - - - - - - - - - - - R A A D S
pt040421_POPTR_    F K - - - D F G Q R S S Q Q Y A R I L T A K D L P S K V S S S S C C S S T T S S S S S T L S R A N A T A G T K R A A D S
 
AT2G33310.1     A S H A G S S P P R S S Q V V G W P P I G S H R M N S L V N N Q A T K S A R E E E E A G K K K V K D D E P K D V T K K V
pt041570_POPTR_    V S H E G G S P T A G S Q V V G W P P I R A Y R M N S L V N Q - - A K A A R A E E D K G I G E - K D I S K D N L K K K I
pt040422_POPTR_    V S A S N G A - - A - S Q V V G W P P I R S H R M H I M V N Q - - A K S Q A T E E F N S M N K - - - - R K N A V E E K V
pt034335_POPTR_    V S H E G G S P T A G S Q V V G W P P I R A Y R M N S L V S Q - - A K A A R A E E E K G I G E - K D K S K E N L K K K I
pt034336_POPTR_    V S H E G G S P T A G S Q V V G W P P I R A Y R M N S L V S Q - - A K A A R A E E E K G I G E - K D K S K E N L K K K I
pt040421_POPTR_    V S A S N G A - - A S S Q V V G W P P I R S H R M H I M V N Q - - A K S Q A T E E F N S M N K - - - - R K N A V E E K V
 
AT2G33310.1     - - - - - - - - - - N G K V Q V G - F I K V N M D G V A I G R K V D L N A H S S Y E N L A Q T L E D M F F R - - T N P G
pt041570_POPTR_    C N G N K T S A P S N E K G H L G - F V K V N M D G I P I G R K V D L N A H A C Y E T L A Q A L E E M F F R S A T T I N
pt040422_POPTR_    - - G N K N I N I G N T K T R T S L F V K V N M D G T L I G R K V D L N A H G C Y E T L A Q A L E N M F L R T T T T L N
pt034335_POPTR_    C N G N K T N A T G N E K G H L G - F V K V N M D G V P I G R K V D L N A H A C Y E T L A Q A L E E M F F R S T T T I N
pt034336_POPTR_    C N G N K T N A T G N E K G H L G - F V K V N M D G V P I G R K V D L N A H A C Y E T L A Q A L E E M F F R S T T T I N
pt040421_POPTR_    - - G N K N I N I G N T K T R T S L F V K V N M D G T L I G R K V D L N A H G C Y E T L A Q A L E N M F L R T T T T L N
 
AT2G33310.1     T V G L T S - - - - - - - Q F T K P L R L L D G S S E F V L T Y E D K E G D W M L V G D V P W R M F I N S V K R L R V M
pt041570_POPTR_    S I G G E K R - - - - - - Q V T K P S K L L D G L S E F L L T Y E D K E G D W M L V G D V P W G M F L N S V K R L R I M
pt040422_POPTR_    M A R L S T P E H K I M I D A K R H S Q L L G G S S E F V L T Y E D K D G D W M L V G D V P W G M F I S S V K R L R I M
pt034335_POPTR_    S I G G Q K - - - - - - - P L S K F S K L L D G S S E F V L T Y E D K E G D W M L V G D V P W G M F L T S V K R L R I M
pt034336_POPTR_    S I G G Q K - - - - - - - P L S K F S K L L D G S S E F V L T Y E D K E G D W M L V G D V P W G M F L T S V K R L R I M
pt040421_POPTR_    M A R L S T P E H K I M I D A K R H S Q L L G G S S E F V L T Y E D K D G D W M L V G D V P W G M F I S S V K R L R I M
 
AT2G33310.1     K T S E A N G L A A R N Q E P N E R Q R K Q P V
pt041570_POPTR_    R T S E A N G L A P R F Q D R N E K Q R I K P V
pt040422_POPTR_    R M S E A T G L G K - - - - - - - - - - - - - -
pt034335_POPTR_    R T S E A N G L A P R L Q D R N E K Q R S K P V
pt034336_POPTR_    R T S E A N G L A P R L Q D R N E K Q R S K P V
pt040421_POPTR_    R M S E A T G L G K - - - - - - - - - - - - - -
 
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