fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G33310.1 GKGESELELGLGLSLG at 12/246 in AT2G33310.1
GKGESELELGLGLSLG at 12/247 in AT2G33310.2
GKGESELELGLGLSLG at 12/246 in AT2G33310.3
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os010503 AGDDEELELGLSLGSK in 33/280 AT2G33310.3 1st_not 0.439024390 II
HRSYKTLALALELMFT in 188/280
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G33310.1     ------------------MITELEMGKGESELELGLGLSLGGGTAAKIGKSGGGGAWGER
Os010503_Os02t0 MRGGVAGPTAGEPPGTEAEAEEVEESSAGDDEELELGLSLGSKKQQQQQHA--------P
                                     *:* ... .: ** ******. .  :  ::         

AT2G33310.1     GRLLTAKDF---------PSVGSKRAADSASHAG---------SSP-------PRSSQVV
Os010503_Os02t0 CRILTARDLQPAAALSPDSSVSSSSPAAAAAAGGKRAEGPTATTSPGTVASGHPHSFGVV
                 *:***:*:         .**.*. .* :*: .*         :**       *:*  **

AT2G33310.1     GWPPIGSHRMNSLVNNQATKSAREEEEAGKKKVKDDEPKDVTK-----KVNGKVQVGFIK
Os010503_Os02t0 GWPPIRQFRMNSLF-NQAKENTSETD---TKKTATNE-SDVQKDKEEGEKKGRV-AGWVK
                ***** ..*****. ***.:.: * :   .**.  :* .** *     : :*:* .*::*

AT2G33310.1     VNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGL-TSQFTKPLRLLDGSSEFV
Os010503_Os02t0 VNMDGEVIGRKVDLNAHRSYKTLALALELMF--TKP-SIGLCASHNTNSLKLLDNSAEYQ
                ***** .********** **:.** :** **  *:* ::** :*: *:.*:***.*:*: 

AT2G33310.1     LTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQE-----PNERQRKQPV
Os010503_Os02t0 LTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQRYQGIHRTIASTRGRS---
                *****::***********.**:.******:*:**:****. * *      .. * *.
BoxShade v3.31 C (beta, 970507) Output
AT2G33310.1     - - - - - - - - - - - - - - - - - - M I T E L E M G K G E S E L E L G L G L S L G G G T A A K I G K S G G G G A W G E R
Os010503_Os02t0    M R G G V A G P T A G E P P G T E A E A E E V E E S S A G D D E E L E L G L S L G S K K Q Q Q Q Q H A - - - - - - - - P
 
AT2G33310.1     G R L L T A K D F - - - - - - - - - P S V G S K R A A D S A S H A G - - - - - - - - - S S P - - - - - - - P R S S Q V V
Os010503_Os02t0    C R I L T A R D L Q P A A A L S P D S S V S S S S P A A A A A A G G K R A E G P T A T T S P G T V A S G H P H S F G V V
 
AT2G33310.1     G W P P I G S H R M N S L V N N Q A T K S A R E E E E A G K K K V K D D E P K D V T K - - - - - K V N G K V Q V G F I K
Os010503_Os02t0    G W P P I R Q F R M N S L F - N Q A K E N T S E T D - - - T K K T A T N E - S D V Q K D K E E G E K K G R V - A G W V K
 
AT2G33310.1     V N M D G V A I G R K V D L N A H S S Y E N L A Q T L E D M F F R T N P G T V G L - T S Q F T K P L R L L D G S S E F V
Os010503_Os02t0    V N M D G E V I G R K V D L N A H R S Y K T L A L A L E L M F - - T K P - S I G L C A S H N T N S L K L L D N S A E Y Q
 
AT2G33310.1     L T Y E D K E G D W M L V G D V P W R M F I N S V K R L R V M K T S E A N G L A A R N Q E - - - - - P N E R Q R K Q P V
Os010503_Os02t0    L T Y E D R D G D W M L V G D V P W E M F V S S V K R L R I M R T S D A N G L G Q R Y Q G I H R T I A S T R G R S - - -
 
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