Input
| Putative repression domain
|
|
AT2G33310.1 |
GKGESELELGLGLSLG at 12/246 in AT2G33310.1 |
|
GKGESELELGLGLSLG at 12/247 in AT2G33310.2 |
GKGESELELGLGLSLG at 12/246 in AT2G33310.3 |
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Sb028226 |
GQDDDDLELGLCLGSK in 46/395 |
AT2G33310.3 |
1st_not |
0.455284552 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT2G33310.1 -----------------------MITELEMGKGESEL--------ELGLGLSLGGGTAAK
Sb028226_Sorbi1 MRGGGAGPTAAFISGDPPPAAAEEVEENSGGEGDEEVVVVGQDDDDLELGLCLG----SK
: * . *:*:.*: :* ***.** :*
AT2G33310.1 IGKSGGGGAWGERGRLLTAKDF---------------PSVG------SKRA-ADSASHAG
Sb028226_Sorbi1 KQQPSPAPC-----RILTARDLQPGSLSPDSSVSSSSPAAGAGAAAPSKRAKADAAPNAT
:.. . . *:***:*: *:.* **** **:*.:*
AT2G33310.1 SSP-------PRSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKK--VKDDEPKDV
Sb028226_Sorbi1 TSPGTAVPGHPQSYGVVGWPPIRTFRMNSLF-NQAKENA---SEAGTKKPTVESDMQEDK
:** *:* ******* :.*****. ***.:.* .***.** *:.* :*
AT2G33310.1 TKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFT
Sb028226_Sorbi1 EESKKGRV-VGWVKVNMEGDIIGRKVDLNAHRSYKTLASALELMFMK--PSISLCTSSSS
:. :*:* **::****:* ********** **:.**.:** **:: *. **. :
AT2G33310.1 KPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEPN
Sb028226_Sorbi1 KSLKLLDNSSEYQLTYEDRDGDWMLVGDVPWEMFVGSVKRLKIMRTSDANGLGPRFQGPH
*.*:***.***: *****::***********.**:.*****::*:**:****..* * *:
AT2G33310.1 E------RQRKQPV
Sb028226_Sorbi1 KPTAACTRGRI---
: * *
BoxShade v3.31 C (beta, 970507) Output
AT2G33310.1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
I |
T |
E |
L |
E |
M |
G |
K |
G |
E |
S |
E |
L |
- |
- |
- |
- |
- |
- |
- |
- |
E |
L |
G |
L |
G |
L |
S |
L |
G |
G |
G |
T |
A |
A |
K |
Sb028226_Sorbi1 |
M |
R |
G |
G |
G |
A |
G |
P |
T |
A |
A |
F |
I |
S |
G |
D |
P |
P |
P |
A |
A |
A |
E |
E |
V |
E |
E |
N |
S |
G |
G |
E |
G |
D |
E |
E |
V |
V |
V |
V |
G |
Q |
D |
D |
D |
D |
L |
E |
L |
G |
L |
C |
L |
G |
- |
- |
- |
- |
S |
K |
|
AT2G33310.1 |
I |
G |
K |
S |
G |
G |
G |
G |
A |
W |
G |
E |
R |
G |
R |
L |
L |
T |
A |
K |
D |
F |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
P |
S |
V |
G |
- |
- |
- |
- |
- |
- |
S |
K |
R |
A |
- |
A |
D |
S |
A |
S |
H |
A |
G |
Sb028226_Sorbi1 |
K |
Q |
Q |
P |
S |
P |
A |
P |
C |
- |
- |
- |
- |
- |
R |
I |
L |
T |
A |
R |
D |
L |
Q |
P |
G |
S |
L |
S |
P |
D |
S |
S |
V |
S |
S |
S |
S |
P |
A |
A |
G |
A |
G |
A |
A |
A |
P |
S |
K |
R |
A |
K |
A |
D |
A |
A |
P |
N |
A |
T |
|
AT2G33310.1 |
S |
S |
P |
- |
- |
- |
- |
- |
- |
- |
P |
R |
S |
S |
Q |
V |
V |
G |
W |
P |
P |
I |
G |
S |
H |
R |
M |
N |
S |
L |
V |
N |
N |
Q |
A |
T |
K |
S |
A |
R |
E |
E |
E |
E |
A |
G |
K |
K |
K |
- |
- |
V |
K |
D |
D |
E |
P |
K |
D |
V |
Sb028226_Sorbi1 |
T |
S |
P |
G |
T |
A |
V |
P |
G |
H |
P |
Q |
S |
Y |
G |
V |
V |
G |
W |
P |
P |
I |
R |
T |
F |
R |
M |
N |
S |
L |
F |
- |
N |
Q |
A |
K |
E |
N |
A |
- |
- |
- |
S |
E |
A |
G |
T |
K |
K |
P |
T |
V |
E |
S |
D |
M |
Q |
E |
D |
K |
|
AT2G33310.1 |
T |
K |
K |
V |
N |
G |
K |
V |
Q |
V |
G |
F |
I |
K |
V |
N |
M |
D |
G |
V |
A |
I |
G |
R |
K |
V |
D |
L |
N |
A |
H |
S |
S |
Y |
E |
N |
L |
A |
Q |
T |
L |
E |
D |
M |
F |
F |
R |
T |
N |
P |
G |
T |
V |
G |
L |
T |
S |
Q |
F |
T |
Sb028226_Sorbi1 |
E |
E |
S |
K |
K |
G |
R |
V |
- |
V |
G |
W |
V |
K |
V |
N |
M |
E |
G |
D |
I |
I |
G |
R |
K |
V |
D |
L |
N |
A |
H |
R |
S |
Y |
K |
T |
L |
A |
S |
A |
L |
E |
L |
M |
F |
M |
K |
- |
- |
P |
S |
I |
S |
L |
C |
T |
S |
S |
S |
S |
|
AT2G33310.1 |
K |
P |
L |
R |
L |
L |
D |
G |
S |
S |
E |
F |
V |
L |
T |
Y |
E |
D |
K |
E |
G |
D |
W |
M |
L |
V |
G |
D |
V |
P |
W |
R |
M |
F |
I |
N |
S |
V |
K |
R |
L |
R |
V |
M |
K |
T |
S |
E |
A |
N |
G |
L |
A |
A |
R |
N |
Q |
E |
P |
N |
Sb028226_Sorbi1 |
K |
S |
L |
K |
L |
L |
D |
N |
S |
S |
E |
Y |
Q |
L |
T |
Y |
E |
D |
R |
D |
G |
D |
W |
M |
L |
V |
G |
D |
V |
P |
W |
E |
M |
F |
V |
G |
S |
V |
K |
R |
L |
K |
I |
M |
R |
T |
S |
D |
A |
N |
G |
L |
G |
P |
R |
F |
Q |
G |
P |
H |
|
AT2G33310.1 |
E |
- |
- |
- |
- |
- |
- |
R |
Q |
R |
K |
Q |
P |
V |
Sb028226_Sorbi1 |
K |
P |
T |
A |
A |
C |
T |
R |
G |
R |
I |
- |
- |
- |
|
|