fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G33310.1 GKGESELELGLGLSLG at 12/246 in AT2G33310.1
GKGESELELGLGLSLG at 12/247 in AT2G33310.2
GKGESELELGLGLSLG at 12/246 in AT2G33310.3
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb028226 GQDDDDLELGLCLGSK in 46/395 AT2G33310.3 1st_not 0.455284552 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G33310.1     -----------------------MITELEMGKGESEL--------ELGLGLSLGGGTAAK
Sb028226_Sorbi1 MRGGGAGPTAAFISGDPPPAAAEEVEENSGGEGDEEVVVVGQDDDDLELGLCLG----SK
                                        : * . *:*:.*:        :* ***.**    :*

AT2G33310.1     IGKSGGGGAWGERGRLLTAKDF---------------PSVG------SKRA-ADSASHAG
Sb028226_Sorbi1 KQQPSPAPC-----RILTARDLQPGSLSPDSSVSSSSPAAGAGAAAPSKRAKADAAPNAT
                  :.. . .     *:***:*:               *:.*      **** **:*.:* 

AT2G33310.1     SSP-------PRSSQVVGWPPIGSHRMNSLVNNQATKSAREEEEAGKKK--VKDDEPKDV
Sb028226_Sorbi1 TSPGTAVPGHPQSYGVVGWPPIRTFRMNSLF-NQAKENA---SEAGTKKPTVESDMQEDK
                :**       *:*  ******* :.*****. ***.:.*   .***.**  *:.*  :* 

AT2G33310.1     TKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFT
Sb028226_Sorbi1 EESKKGRV-VGWVKVNMEGDIIGRKVDLNAHRSYKTLASALELMFMK--PSISLCTSSSS
                 :. :*:* **::****:*  ********** **:.**.:** **::  *.    **. :

AT2G33310.1     KPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEPN
Sb028226_Sorbi1 KSLKLLDNSSEYQLTYEDRDGDWMLVGDVPWEMFVGSVKRLKIMRTSDANGLGPRFQGPH
                *.*:***.***: *****::***********.**:.*****::*:**:****..* * *:

AT2G33310.1     E------RQRKQPV
Sb028226_Sorbi1 KPTAACTRGRI---
                :      * *
BoxShade v3.31 C (beta, 970507) Output
AT2G33310.1     - - - - - - - - - - - - - - - - - - - - - - - M I T E L E M G K G E S E L - - - - - - - - E L G L G L S L G G G T A A K
Sb028226_Sorbi1    M R G G G A G P T A A F I S G D P P P A A A E E V E E N S G G E G D E E V V V V G Q D D D D L E L G L C L G - - - - S K
 
AT2G33310.1     I G K S G G G G A W G E R G R L L T A K D F - - - - - - - - - - - - - - - P S V G - - - - - - S K R A - A D S A S H A G
Sb028226_Sorbi1    K Q Q P S P A P C - - - - - R I L T A R D L Q P G S L S P D S S V S S S S P A A G A G A A A P S K R A K A D A A P N A T
 
AT2G33310.1     S S P - - - - - - - P R S S Q V V G W P P I G S H R M N S L V N N Q A T K S A R E E E E A G K K K - - V K D D E P K D V
Sb028226_Sorbi1    T S P G T A V P G H P Q S Y G V V G W P P I R T F R M N S L F - N Q A K E N A - - - S E A G T K K P T V E S D M Q E D K
 
AT2G33310.1     T K K V N G K V Q V G F I K V N M D G V A I G R K V D L N A H S S Y E N L A Q T L E D M F F R T N P G T V G L T S Q F T
Sb028226_Sorbi1    E E S K K G R V - V G W V K V N M E G D I I G R K V D L N A H R S Y K T L A S A L E L M F M K - - P S I S L C T S S S S
 
AT2G33310.1     K P L R L L D G S S E F V L T Y E D K E G D W M L V G D V P W R M F I N S V K R L R V M K T S E A N G L A A R N Q E P N
Sb028226_Sorbi1    K S L K L L D N S S E Y Q L T Y E D R D G D W M L V G D V P W E M F V G S V K R L K I M R T S D A N G L G P R F Q G P H
 
AT2G33310.1     E - - - - - - R Q R K Q P V
Sb028226_Sorbi1    K P T A A C T R G R I - - -
 
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