fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G33310.1 GKGESELELGLGLSLG at 12/246 in AT2G33310.1
GKGESELELGLGLSLG at 12/247 in AT2G33310.2
GKGESELELGLGLSLG at 12/246 in AT2G33310.3
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm035802 CPEESELELGLGLSLS in 24/291 AT2G33310.3 1st_not 0.482384823 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G33310.1     -----------MITELEMGKGESELELGLGLSLGGGTAAKIGKSGGGGAWGERGRLLTAK
gm035802_Glyma1 MSTVSKDDNLVLSSEDSSCPEESELELGLGLSLSSGPSSKSHHHHVHAPTTLYARIYTAK
                           : :* .    ************..*.::*  :    ..    .*: ***

AT2G33310.1     DFPSVGSKRAADSASHAGSSP-----------------PRSSQVVGWPPIGSHRMNSLVN
gm035802_Glyma1 DFPSSAAAASSSPSSSSSSSPNITAGTKRAAADSLVANNRPSQVVGWPPLRTYRVNSF-N
                **** .:  ::..:* :.***                  *.********: ::*:**: *

AT2G33310.1     NQAT-----KSAREEEEAGKKKVKDDEPKDVTKKVNGKVQVG-----FIKVNMDGVAIGR
gm035802_Glyma1 SHAKSTEVFNSVAEKSKINNTVVRKTNDNDNDNNINAKEKRHLRSSLFVKVNMDGIPIGR
                .:*.     :*. *:.: .:. *:. : :*  :::*.* :       *:******:.***

AT2G33310.1     KVDLNAHSSYENLAQTLEDMFFRTNPGTV---------GLTSQFTKPLRLLDGSSEFVLT
gm035802_Glyma1 KVDLSAHSSYETLAQTLEDMFNESTTVTTCKGSNGEDYGIIIGGERHSKLLDGSSKFVLT
                ****.******.********* .:.. *.         *:     :  :******:****

AT2G33310.1     YEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEPNERQRKQPV
gm035802_Glyma1 YEDKEGDWMLVGDVPWGMFLSSVRRLRIMRTSEANGLAPRLEE-NIKQRCKPI
                **************** **:.**:***:*:********.* :* * :** :*:
BoxShade v3.31 C (beta, 970507) Output
AT2G33310.1     - - - - - - - - - - - M I T E L E M G K G E S E L E L G L G L S L G G G T A A K I G K S G G G G A W G E R G R L L T A K
gm035802_Glyma1    M S T V S K D D N L V L S S E D S S C P E E S E L E L G L G L S L S S G P S S K S H H H H V H A P T T L Y A R I Y T A K
 
AT2G33310.1     D F P S V G S K R A A D S A S H A G S S P - - - - - - - - - - - - - - - - - P R S S Q V V G W P P I G S H R M N S L V N
gm035802_Glyma1    D F P S S A A A A S S S P S S S S S S S P N I T A G T K R A A A D S L V A N N R P S Q V V G W P P L R T Y R V N S F - N
 
AT2G33310.1     N Q A T - - - - - K S A R E E E E A G K K K V K D D E P K D V T K K V N G K V Q V G - - - - - F I K V N M D G V A I G R
gm035802_Glyma1    S H A K S T E V F N S V A E K S K I N N T V V R K T N D N D N D N N I N A K E K R H L R S S L F V K V N M D G I P I G R
 
AT2G33310.1     K V D L N A H S S Y E N L A Q T L E D M F F R T N P G T V - - - - - - - - - G L T S Q F T K P L R L L D G S S E F V L T
gm035802_Glyma1    K V D L S A H S S Y E T L A Q T L E D M F N E S T T V T T C K G S N G E D Y G I I I G G E R H S K L L D G S S K F V L T
 
AT2G33310.1     Y E D K E G D W M L V G D V P W R M F I N S V K R L R V M K T S E A N G L A A R N Q E P N E R Q R K Q P V
gm035802_Glyma1    Y E D K E G D W M L V G D V P W G M F L S S V R R L R I M R T S E A N G L A P R L E E - N I K Q R C K P I
 
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