fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G33310.1 GKGESELELGLGLSLG at 12/246 in AT2G33310.1
GKGESELELGLGLSLG at 12/247 in AT2G33310.2
GKGESELELGLGLSLG at 12/246 in AT2G33310.3
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm026737 CPEESELELGLGLSLS in 24/287 AT2G33310.3 not_not 0.471544715 III
Gm052353 not found in 211aa AT2G33310.2 not_not 0.430894308 III
Gm052350 not found in 229aa AT2G33310.2 not_not 0.428184281 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G33310.1     MIT------ELEMGK------GESELELGLGLSLGGGTAAKIGKSGGGGAWGERGRLLTA
gm026737_Glyma1 MST-VSKDDNLALSSEDSSCPEESELELGLGLSLSSGSSSKSHHH-------HHARIYTA
gm052353_Glyma1 ----MCR-----------------------------------------------------
gm052350_Glyma1 MTTLLLRILHLTL-----------------------------------------------
                                                                            

AT2G33310.1     KDFPSVGSKRAADSASHAGSS--------------------PPRSSQVVGWPPIGSHRMN
gm026737_Glyma1 KDFPSSAAAAAAAASSPSSSSSSPNNITAGTKRAAADSLVANNRPSQVVGWPPLRTYRVN
gm052353_Glyma1 ----------------------KEIPMTGLTR-----------KADQVVGWPPLGAYRMN
gm052350_Glyma1 -NFLSPYA--------PANSSFTSLPITA---------------PSQVVGWPPLGAYRMN
                                                            ..*******: ::*:*

AT2G33310.1     SLVNNQATKS-----------AREEEEAGKKKVKD--DEPKDVTKKVNGKVQVG-FIKVN
gm026737_Glyma1 SF--NSHAKS--TEVFNSVAEKSKTDNTVARKTNDNGND-NNINAKEKRHLRSSLFVKVN
gm052353_Glyma1 SY--NSHAKSPATEVFNSTLDKRASNSAGVRKSADGGSDSSNIISKEKGNLRTSLFVKVK
gm052350_Glyma1 SY--NSHAKSPATEVFNSTLDKRASNSAGVRKSADGGSDSSNIISKEKGNLRTSLFVKVK
                *   *. :**               :.:  :*  *  .: .::  * : ::: . *:**:

AT2G33310.1     MDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQ-------------FTKPL
gm026737_Glyma1 MDGIPIGRKVDLSAHSSYETLAQTLEDMF---NESTTVTTCK-GSNGEDYGFIIGGERHS
gm052353_Glyma1 MDGIPIGRKVDLGAHDSYETLAQTLEDMF---DESTTVLTHKVGSNGEDHGTEVGTDGHS
gm052350_Glyma1 MDGIPIGRKVDLGAHDSYETLAQTLEDMF---DESTTVLTHK-GSNGEDHGTEVGTDGHS
                ***:.*******.**.***.*********   : .*.  * :                  

AT2G33310.1     RLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQEPNERQ
gm026737_Glyma1 KLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFFSSVRRLRIMRTSEANGLAPRLEENIKKR
gm052353_Glyma1 KLLDGSSDFVLTYEDKEGDWVLVGDVPWWMFLNSVRRLRIMRTPEDNGLAPRLEEKNRRS
gm052350_Glyma1 KLLDGSSDFVLTYEDKEGDWVLVGDVPWWMFLNSVRRLRIMRTPEDNGLAPRLEEKNRRS
                :******.************:******* **:.**:***:*:*.* ****.* :*  .: 

AT2G33310.1     RKQPV-
gm026737_Glyma1 CKPI--
gm052353_Glyma1 NTSSYR
gm052350_Glyma1 NTSSYR
                 .
BoxShade v3.31 C (beta, 970507) Output
AT2G33310.1     M I T - - - - - - E L E M G K - - - - - - G E S E L E L G L G L S L G G G T A A K I G K S G G G G A W G E R G R L L T A
gm026737_Glyma1    M S T - V S K D D N L A L S S E D S S C P E E S E L E L G L G L S L S S G S S S K S H H H - - - - - - - H H A R I Y T A
gm052353_Glyma1    - - - - M C R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm052350_Glyma1    M T T L L L R I L H L T L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G33310.1     K D F P S V G S K R A A D S A S H A G S S - - - - - - - - - - - - - - - - - - - - P P R S S Q V V G W P P I G S H R M N
gm026737_Glyma1    K D F P S S A A A A A A A A S S P S S S S S S P N N I T A G T K R A A A D S L V A N N R P S Q V V G W P P L R T Y R V N
gm052353_Glyma1    - - - - - - - - - - - - - - - - - - - - - - K E I P M T G L T R - - - - - - - - - - - K A D Q V V G W P P L G A Y R M N
gm052350_Glyma1    - N F L S P Y A - - - - - - - - P A N S S F T S L P I T A - - - - - - - - - - - - - - - P S Q V V G W P P L G A Y R M N
 
AT2G33310.1     S L V N N Q A T K S - - - - - - - - - - - A R E E E E A G K K K V K D - - D E P K D V T K K V N G K V Q V G - F I K V N
gm026737_Glyma1    S F - - N S H A K S - - T E V F N S V A E K S K T D N T V A R K T N D N G N D - N N I N A K E K R H L R S S L F V K V N
gm052353_Glyma1    S Y - - N S H A K S P A T E V F N S T L D K R A S N S A G V R K S A D G G S D S S N I I S K E K G N L R T S L F V K V K
gm052350_Glyma1    S Y - - N S H A K S P A T E V F N S T L D K R A S N S A G V R K S A D G G S D S S N I I S K E K G N L R T S L F V K V K
 
AT2G33310.1     M D G V A I G R K V D L N A H S S Y E N L A Q T L E D M F F R T N P G T V G L T S Q - - - - - - - - - - - - - F T K P L
gm026737_Glyma1    M D G I P I G R K V D L S A H S S Y E T L A Q T L E D M F - - - N E S T T V T T C K - G S N G E D Y G F I I G G E R H S
gm052353_Glyma1    M D G I P I G R K V D L G A H D S Y E T L A Q T L E D M F - - - D E S T T V L T H K V G S N G E D H G T E V G T D G H S
gm052350_Glyma1    M D G I P I G R K V D L G A H D S Y E T L A Q T L E D M F - - - D E S T T V L T H K - G S N G E D H G T E V G T D G H S
 
AT2G33310.1     R L L D G S S E F V L T Y E D K E G D W M L V G D V P W R M F I N S V K R L R V M K T S E A N G L A A R N Q E P N E R Q
gm026737_Glyma1    K L L D G S S K F V L T Y E D K E G D W M L V G D V P W G M F F S S V R R L R I M R T S E A N G L A P R L E E N I K K R
gm052353_Glyma1    K L L D G S S D F V L T Y E D K E G D W V L V G D V P W W M F L N S V R R L R I M R T P E D N G L A P R L E E K N R R S
gm052350_Glyma1    K L L D G S S D F V L T Y E D K E G D W V L V G D V P W W M F L N S V R R L R I M R T P E D N G L A P R L E E K N R R S
 
AT2G33310.1     R K Q P V -
gm026737_Glyma1    C K P I - -
gm052353_Glyma1    N T S S Y R
gm052350_Glyma1    N T S S Y R
 
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