fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G33480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt029735 not found in 257aa AT5G13180.1 1st_not 0.627204030 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G33480.1     MEKRSSIKNRGVLRLPPGFRFHPTDEELVVQYLRRKVTGLPLPASVIPETDVCKSDPWDL
pt029735_POPTR_ MEKLSFVKN-GVLRLPPGFRFHPTDEELVVQYLKRKVFACPLPASIIPEVDVCKSDPWDL
                *** * :** ***********************:*** . *****:***.**********

AT2G33480.1     PGDCESEMYFFSTREAKYPNGNRSNRSTGSGYWKATGLDKQI--GKKKLVVGMKKTLVFY
pt029735_POPTR_ PGDLEQERYFFSTREAKYPNGNRSNRATGSGYWKATGIDKQIVTSKGHQVVGMKKTLVFY
                *** *.* ******************:**********:****  .* : ***********

AT2G33480.1     KGKPPNGTRTNWVLHEYRLVDSQQ---DSLYGQNM----------NWVLCRVFLKKRSNS
pt029735_POPTR_ RGKPPHGTRTDWIMHEYRLASTETTACNTLKNKNSTQGPVVVPMENWVLCRIFLKKRGTK
                :****:****:*::*****..::    ::* .:*           ******:*****...

AT2G33480.1     NSKRKEDEKEEVENEKETETEREREEENKKSTCPIFYDFMRKDTKKKRRRRRCCDLNLTP
pt029735_POPTR_ N----EEENIQVGNDNRLPKLRATE--------PVFYDFMTKE--------KTTDLNLAP
                *    *:*: :* *::.  . *  *        *:***** *:        :  ****:*

AT2G33480.1     ATCCCCSSSTSSSSVCSSALTHTSSNDNRQEIS-----YRENKFCLFL
pt029735_POPTR_ ------SSSSSGSSGITEEVSCNESDDHEESSSCNSFPYVRRKP----
                      ***:*.**  :. :: ..*:*:.:. *     * ..*
BoxShade v3.31 C (beta, 970507) Output
AT2G33480.1     M E K R S S I K N R G V L R L P P G F R F H P T D E E L V V Q Y L R R K V T G L P L P A S V I P E T D V C K S D P W D L
pt029735_POPTR_    M E K L S F V K N - G V L R L P P G F R F H P T D E E L V V Q Y L K R K V F A C P L P A S I I P E V D V C K S D P W D L
 
AT2G33480.1     P G D C E S E M Y F F S T R E A K Y P N G N R S N R S T G S G Y W K A T G L D K Q I - - G K K K L V V G M K K T L V F Y
pt029735_POPTR_    P G D L E Q E R Y F F S T R E A K Y P N G N R S N R A T G S G Y W K A T G I D K Q I V T S K G H Q V V G M K K T L V F Y
 
AT2G33480.1     K G K P P N G T R T N W V L H E Y R L V D S Q Q - - - D S L Y G Q N M - - - - - - - - - - N W V L C R V F L K K R S N S
pt029735_POPTR_    R G K P P H G T R T D W I M H E Y R L A S T E T T A C N T L K N K N S T Q G P V V V P M E N W V L C R I F L K K R G T K
 
AT2G33480.1     N S K R K E D E K E E V E N E K E T E T E R E R E E E N K K S T C P I F Y D F M R K D T K K K R R R R R C C D L N L T P
pt029735_POPTR_    N - - - - E E E N I Q V G N D N R L P K L R A T E - - - - - - - - P V F Y D F M T K E - - - - - - - - K T T D L N L A P
 
AT2G33480.1     A T C C C C S S S T S S S S V C S S A L T H T S S N D N R Q E I S - - - - - Y R E N K F C L F L
pt029735_POPTR_    - - - - - - S S S S S G S S G I T E E V S C N E S D D H E E S S S C N S F P Y V R R K P - - - -
 
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