fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G33810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt020564 not found in 148aa AT1G53160.1 1st_not 0.669811320 II
Pt024951 not found in 106aa AT2G33810.1 not_1st 0.433962264 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G33810.1     MSMRRSKAEGKRSLRELSEEEEEEEETEDEDT-----FEEEEALEKKQK-------GKAT
pt024951_POPTR_ --METSRAEGKRSLKEI---EDEEEEEDDEDIAGGLGFVDDDKIKKKGKKGS----SGGG
pt020564_POPTR_ --MGTSKAEGKRNLKEI---EDEEEDDDEEDIYTGLGFGDDDKIKKKGRTGSGCGGGGGR
                  *  *:*****.*:*:   *:***: ::**      * ::: ::** :       . . 

AT2G33810.1     SSSGV---CQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQQCSRFHALS
pt024951_POPTR_ SSSMLLVSCQADNCTSDLADAKRYHRRHKVCEFHAKAPFAPVNGLQQRFCQQCSR-----
pt020564_POPTR_ SSSSPPISCQVKNCTTDMTDAKRYHKRHKVCEFHAKASSVLVNGVEQRFCQQCSRFHDLS
                ***     **...**:*::.**:**:*****:*****. . :.*:.*********     

AT2G33810.1     EFDEAKRSCRRRLAGHNERRRKSTTD-------
pt024951_POPTR_ ---------------------------------
pt020564_POPTR_ EFDDSKRSCRRRLAGHNERRRKSSSDNQGEGSN
BoxShade v3.31 C (beta, 970507) Output
AT2G33810.1     M S M R R S K A E G K R S L R E L S E E E E E E E E T E D E D T - - - - - F E E E E A L E K K Q K - - - - - - - G K A T
pt024951_POPTR_    - - M E T S R A E G K R S L K E I - - - E D E E E E E D D E D I A G G L G F V D D D K I K K K G K K G S - - - - S G G G
pt020564_POPTR_    - - M G T S K A E G K R N L K E I - - - E D E E E D D D E E D I Y T G L G F G D D D K I K K K G R T G S G C G G G G G R
 
AT2G33810.1     S S S G V - - - C Q V E S C T A D M S K A K Q Y H K R H K V C Q F H A K A P H V R I S G L H Q R F C Q Q C S R F H A L S
pt024951_POPTR_    S S S M L L V S C Q A D N C T S D L A D A K R Y H R R H K V C E F H A K A P F A P V N G L Q Q R F C Q Q C S R - - - - -
pt020564_POPTR_    S S S S P P I S C Q V K N C T T D M T D A K R Y H K R H K V C E F H A K A S S V L V N G V E Q R F C Q Q C S R F H D L S
 
AT2G33810.1     E F D E A K R S C R R R L A G H N E R R R K S T T D - - - - - - -
pt024951_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt020564_POPTR_    E F D D S K R S C R R R L A G H N E R R R K S S S D N Q G E G S N
 
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