fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G33810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os028209 not found in 216aa AT1G53160.1 1st_not 0.594339622 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G33810.1     MSMRRSKA-------------------------EGKRSLRELSEEEEEEE----------
Os028209_Os07t0 MD-RKDKARKNFSSSSSSSAASMAALAAAAAAGDGGAALPSPMEEDKKPRLVASSLAPVA
                *. *:.**                         :*  :* .  **::: .          

AT2G33810.1     ---------------ETEDEDTFEEEEALEKKQKGKA---TSSSG----VCQVESCTADM
Os028209_Os07t0 GGGGGGSSSSAAVAAGASSSSSSSSVAAAARRGAGRAGGGAPSGGGGGPRCQVERCGVDL
                                :....: ..  *  ::  *:*   :.*.*     **** * .*:

AT2G33810.1     SKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQQCSRFHALSEFDEAKRSCRRRLAGHNE
Os028209_Os07t0 SEAGRYNRRHKVCQTHSKEPVVLVAGLRQRFCQQCSRFHELTEFDDAKRSCRRRLAGHNE
                *:* :*::****** *:* * * ::**:*********** *:***:**************

AT2G33810.1     RRRKSTTD-----------------------------
Os028209_Os07t0 RRRKSAADTAHGENCRHADQDAGRSHQGTGNPPFQIR
                *****::*
BoxShade v3.31 C (beta, 970507) Output
AT2G33810.1     M S M R R S K A - - - - - - - - - - - - - - - - - - - - - - - - - E G K R S L R E L S E E E E E E E - - - - - - - - - -
Os028209_Os07t0    M D - R K D K A R K N F S S S S S S S A A S M A A L A A A A A A G D G G A A L P S P M E E D K K P R L V A S S L A P V A
 
AT2G33810.1     - - - - - - - - - - - - - - - E T E D E D T F E E E E A L E K K Q K G K A - - - T S S S G - - - - V C Q V E S C T A D M
Os028209_Os07t0    G G G G G G S S S S A A V A A G A S S S S S S S S V A A A A R R G A G R A G G G A P S G G G G G P R C Q V E R C G V D L
 
AT2G33810.1     S K A K Q Y H K R H K V C Q F H A K A P H V R I S G L H Q R F C Q Q C S R F H A L S E F D E A K R S C R R R L A G H N E
Os028209_Os07t0    S E A G R Y N R R H K V C Q T H S K E P V V L V A G L R Q R F C Q Q C S R F H E L T E F D D A K R S C R R R L A G H N E
 
AT2G33810.1     R R R K S T T D - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Os028209_Os07t0    R R R K S A A D T A H G E N C R H A D Q D A G R S H Q G T G N P P F Q I R
 
0