fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G33810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm036360 not found in 142aa AT2G33810.1 not_1st 0.636792452 II
Gm041507 not found in 138aa AT2G33810.1 not_1st 0.632075471 II
Gm037008 not found in 138aa AT2G33810.1 not_1st 0.622641509 II
Gm018913 not found in 113aa AT2G33810.1 not_1st 0.400943396 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G33810.1     MSMRRSKAEGKRSLRELSEEEEEEEETEDEDTFE---EEEALEKKQ-----KGKA-TSSS
gm036360_Glyma1 --MDTSRSEGKRVMRYKEEDDDNDDEEEEEVVSEMGFEEDGRRNKRVIRDLYGKR-GSKG
gm018913_Glyma0 --MDTSRYEGKRVLRYKEEDENDDDEEEEE-VSEVGFGADRRRNKRVMRDLHGKRSGSKG
gm041507_Glyma1 --MDESWSEGKRSMSYKEEDEYEEEEEEE--VSE--YRDDGRK-KKVVSS---KR-GSKA
gm037008_Glyma1 --MDGSWSEGKRSMSYKEEDEYEEEEEEE--VSE--YGDDGKK-KRVVSN---KR-GSKA
                  *  *  **** :   .*:: :::* *:  . *     :  . *:       *   *..

AT2G33810.1     G-----VCQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQQCSRFHALSE
gm036360_Glyma1 GGSITPSCQVDNCDADLSEAKQYHRRHKVCEYHAKAPSVHMAGLQQRFCQQCSRFHVLSE
gm018913_Glyma0 GGSMPPSCQVDNCDADLSEAKQYHRRHKVCEYHAKAPSVHMAGLQQRFCQQCSSPS----
gm041507_Glyma1 GGSVPPSCQVDGCSADLSEAKPYHRRHKVCEYHAKAPAVLIGDQHQRFCQQCSRFHELSE
gm037008_Glyma1 GGSVPPSCQVDGCNADLSEAKPYHRRHKVCEYHAKAPAVVIGDQHQRFCQQCSRFHELSE
                *      ***:.* **:*:** **:*****::***** * :.. :********       

AT2G33810.1     FDEAKRSCRRRLAGHNERRRKSTTD----
gm036360_Glyma1 FDDSKRSCRTRLAGHNERRRKYAVD----
gm018913_Glyma0 -----------------------------
gm041507_Glyma1 FDDSKRSCRRRLAGHNERRRKNASEYHEL
gm037008_Glyma1 FDDSKRSCRRRLAGHNERRRKNASEYHGL
BoxShade v3.31 C (beta, 970507) Output
AT2G33810.1     M S M R R S K A E G K R S L R E L S E E E E E E E E T E D E D T F E - - - E E E A L E K K Q - - - - - K G K A - T S S S
gm036360_Glyma1    - - M D T S R S E G K R V M R Y K E E D D D N D D E E E E E V V S E M G F E E D G R R N K R V I R D L Y G K R - G S K G
gm018913_Glyma0    - - M D T S R Y E G K R V L R Y K E E D E N D D D E E E E E - V S E V G F G A D R R R N K R V M R D L H G K R S G S K G
gm041507_Glyma1    - - M D E S W S E G K R S M S Y K E E D E Y E E E E E E E - - V S E - - Y R D D G R K - K K V V S S - - - K R - G S K A
gm037008_Glyma1    - - M D G S W S E G K R S M S Y K E E D E Y E E E E E E E - - V S E - - Y G D D G K K - K R V V S N - - - K R - G S K A
 
AT2G33810.1     G - - - - - V C Q V E S C T A D M S K A K Q Y H K R H K V C Q F H A K A P H V R I S G L H Q R F C Q Q C S R F H A L S E
gm036360_Glyma1    G G S I T P S C Q V D N C D A D L S E A K Q Y H R R H K V C E Y H A K A P S V H M A G L Q Q R F C Q Q C S R F H V L S E
gm018913_Glyma0    G G S M P P S C Q V D N C D A D L S E A K Q Y H R R H K V C E Y H A K A P S V H M A G L Q Q R F C Q Q C S S P S - - - -
gm041507_Glyma1    G G S V P P S C Q V D G C S A D L S E A K P Y H R R H K V C E Y H A K A P A V L I G D Q H Q R F C Q Q C S R F H E L S E
gm037008_Glyma1    G G S V P P S C Q V D G C N A D L S E A K P Y H R R H K V C E Y H A K A P A V V I G D Q H Q R F C Q Q C S R F H E L S E
 
AT2G33810.1     F D E A K R S C R R R L A G H N E R R R K S T T D - - - -
gm036360_Glyma1    F D D S K R S C R T R L A G H N E R R R K Y A V D - - - -
gm018913_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm041507_Glyma1    F D D S K R S C R R R L A G H N E R R R K N A S E Y H E L
gm037008_Glyma1    F D D S K R S C R R R L A G H N E R R R K N A S E Y H G L
 
0