fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G33810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm018912 not found in 146aa AT2G33810.1 1st_1st 0.646226415 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G33810.1     MSMRRSKAEGKRSLRELSEEEEEEEETEDEDTFEEEEALE-------KKQK-------GK
gm018912_Glyma0 --MDTSRYEGKRVLR-------YKEEDENDDDEEEEEVSEVGFGADRRRNKRVMRDLHGK
                  *  *: **** **        :** *::*  ****. *       :::*       **

AT2G33810.1     ATSSSG------VCQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQQCSR
gm018912_Glyma0 RSGSKGGGSMPPSCQVDNCDADLSEAKQYHRRHKVCEYHAKAPSVHMAGLQQRFCQQCSR
                 :.*.*       ***:.* **:*:*****:*****::***** *:::**:*********

AT2G33810.1     FHALSEFDEAKRSCRRRLAGHNERRRKSTTD----
gm018912_Glyma0 FHELSEFDDSKRSCRTRLAGHNERRRKNAVDYHGE
                ** *****::***** ***********.:.*
BoxShade v3.31 C (beta, 970507) Output
AT2G33810.1     M S M R R S K A E G K R S L R E L S E E E E E E E E T E D E D T F E E E E A L E - - - - - - - K K Q K - - - - - - - G K
gm018912_Glyma0    - - M D T S R Y E G K R V L R - - - - - - - Y K E E D E N D D D E E E E E V S E V G F G A D R R R N K R V M R D L H G K
 
AT2G33810.1     A T S S S G - - - - - - V C Q V E S C T A D M S K A K Q Y H K R H K V C Q F H A K A P H V R I S G L H Q R F C Q Q C S R
gm018912_Glyma0    R S G S K G G G S M P P S C Q V D N C D A D L S E A K Q Y H R R H K V C E Y H A K A P S V H M A G L Q Q R F C Q Q C S R
 
AT2G33810.1     F H A L S E F D E A K R S C R R R L A G H N E R R R K S T T D - - - -
gm018912_Glyma0    F H E L S E F D D S K R S C R T R L A G H N E R R R K N A V D Y H G E
 
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