fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G33880.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt018590 not found in 390aa AT2G33880.1 1st_1st 0.461406518 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G33880.1     MASSNRHWPSMFKSK---PHPHQWQHDIN-SPLLPSASHRSSPFSS--GCEVERSPEPKP
pt018590_POPTR_ MASSNKHWPSMFKSKPCNPHDHQWQHDINPSSIISTGCHR-TPYTSVPGCD-ERSPEPKP
                *****:*********   ** ******** *.::.:..** :*::*  **: ********

AT2G33880.1     RWNPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSKHK
pt018590_POPTR_ RWNPKPDQIRILEAIFNSGMVNPPRDEIRKIRVQLQEYGQVGDANVFYWFQNRKSRSKHR
                ******:******************:***:**.**************************:

AT2G33880.1     LRLLHNHSKHSLPQ---TQPQPQPQPSASSSSSSSSSSSKSTKPRKSK------------
pt018590_POPTR_ LRNLQNSKQHSSQQQKITSPTTKPVTANLAAPSSSSSSSEKSSPKGSKRTLSLSSPTFID
                ** *:* .:**  *   *.* .:* .:  ::.*******:.:.*: **            

AT2G33880.1     --NKNNTNLSLGGSQMMGMFPPEPAFLFPVSTVGGFEGITVSSQLGF----LSGDMIEQQ
pt018590_POPTR_ ASNSPTSSVNKTYFQAHNEFVPEPFFFHSQQTGGGGTGAFAQ---GFCFSELSNMVHVQD
                  *. .:.:.    *  . * *** *:.. .* **  *  ..   **    **. :  *:

AT2G33880.1     KPAPTCTGLLLSEIMNGSVSYGTHHQQHLSEKEVEEMRMKMLQQPQTQICYATTNHQIAS
pt018590_POPTR_ HTVGPCSRLLLSEIMNSSASKKVNH---------EERNLKM----QPQLCYTPVSPVTGS
                :.. .*: ********.*.*  .:*         ** .:**    *.*:**:...   .*

AT2G33880.1     YNNNNNNNNIMLHIPPTTSTATTITTSHSLATVPSTSDQL----QVQADARIRVFINEME
pt018590_POPTR_ ---------IGLAPPLTPSTDT------STFAFQTTINQIQGLGQSSGTTMLTVFINDVA
                         * *  * *.** *      *  :. :* :*:    * .. : : ****:: 

AT2G33880.1     LEVSSGPFNVRDAFGEEVVLINSAGQPIVTDEYGVALHPLQHGASYYLI-----------
pt018590_POPTR_ FEVTMGPFNVREAFGDDVLLIQSSGQPVLTNECGVTLQSLQHGAFYYLVPFSMSEHILKK
                :**: ******:***::*:**:*:***::*:* **:*:.***** ***:           

AT2G33880.1     ---
pt018590_POPTR_ NGK
BoxShade v3.31 C (beta, 970507) Output
AT2G33880.1     M A S S N R H W P S M F K S K - - - P H P H Q W Q H D I N - S P L L P S A S H R S S P F S S - - G C E V E R S P E P K P
pt018590_POPTR_    M A S S N K H W P S M F K S K P C N P H D H Q W Q H D I N P S S I I S T G C H R - T P Y T S V P G C D - E R S P E P K P
 
AT2G33880.1     R W N P K P E Q I R I L E A I F N S G M V N P P R E E I R R I R A Q L Q E Y G Q V G D A N V F Y W F Q N R K S R S K H K
pt018590_POPTR_    R W N P K P D Q I R I L E A I F N S G M V N P P R D E I R K I R V Q L Q E Y G Q V G D A N V F Y W F Q N R K S R S K H R
 
AT2G33880.1     L R L L H N H S K H S L P Q - - - T Q P Q P Q P Q P S A S S S S S S S S S S S K S T K P R K S K - - - - - - - - - - - -
pt018590_POPTR_    L R N L Q N S K Q H S S Q Q Q K I T S P T T K P V T A N L A A P S S S S S S S E K S S P K G S K R T L S L S S P T F I D
 
AT2G33880.1     - - N K N N T N L S L G G S Q M M G M F P P E P A F L F P V S T V G G F E G I T V S S Q L G F - - - - L S G D M I E Q Q
pt018590_POPTR_    A S N S P T S S V N K T Y F Q A H N E F V P E P F F F H S Q Q T G G G G T G A F A Q - - - G F C F S E L S N M V H V Q D
 
AT2G33880.1     K P A P T C T G L L L S E I M N G S V S Y G T H H Q Q H L S E K E V E E M R M K M L Q Q P Q T Q I C Y A T T N H Q I A S
pt018590_POPTR_    H T V G P C S R L L L S E I M N S S A S K K V N H - - - - - - - - - E E R N L K M - - - - Q P Q L C Y T P V S P V T G S
 
AT2G33880.1     Y N N N N N N N N I M L H I P P T T S T A T T I T T S H S L A T V P S T S D Q L - - - - Q V Q A D A R I R V F I N E M E
pt018590_POPTR_    - - - - - - - - - I G L A P P L T P S T D T - - - - - - S T F A F Q T T I N Q I Q G L G Q S S G T T M L T V F I N D V A
 
AT2G33880.1     L E V S S G P F N V R D A F G E E V V L I N S A G Q P I V T D E Y G V A L H P L Q H G A S Y Y L I - - - - - - - - - - -
pt018590_POPTR_    F E V T M G P F N V R E A F G D D V L L I Q S S G Q P V L T N E C G V T L Q S L Q H G A F Y Y L V P F S M S E H I L K K
 
AT2G33880.1     - - -
pt018590_POPTR_    N G K
 
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