fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G34140.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm012581 not found in 165aa AT1G29160.1 1st_not 0.456824512 II
Pt019779 not found in 159aa AT1G29160.1 1st_not 0.506963788 II
Pt024374 not found in 161aa AT1G29160.1 not_not 0.484679665 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G34140.1     ----MATQDSQGIKLFGKTIAFNTRTIKNEEETHPPEQEATIAVRSSSSSDLTAE-KRPD
pt024374_POPTR_ ----MASQE-EGIKLFGATITLHDGQVISKED--------------QNKENPTID-KRPE
gm012581_Glyma0 MAEAQSGQASEGIKLFGTTITLHGRE--RKED-------------RNDSEDGTEEIKRPD
pt019779_POPTR_ ----MASQE-EGIKLFGATITLHDKQEGNKED--------------PNKENPTTD-KRPE
                     : *  :****** **:::      :*:               ...: * : ***:

AT2G34140.1     KIIACPRCKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSKPPGR
pt024374_POPTR_ KIIQCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPGR
gm012581_Glyma0 KIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKVKP---
pt019779_POPTR_ KVIPCPRCKSMETKFCYFNNYNVNQPRYFCKGCQRYWTAGGALRNVPVGAGRRKTKPPGR
                *:* ***********************:*****:******************** **   

AT2G34140.1     VVVG-----MLGDGN-GV-RQVELINGLLVEEWQHAAAAAHGSFRHDFPMKRLRC-YSDG
pt024374_POPTR_ GGPGGYSEECLFDGSGGVIHQFEL-DGVVLEELH--LATTHGGFRQVFPVKRRRSGGSGG
gm012581_Glyma0 --------------------QFGQEERLALDEWH-VAAVAHGDFRQLFPSKRRRM-SSAQ
pt019779_POPTR_ VGLDGYSEGCLYDGSGGV-HRFEL-DGMVLEEWH--LATTHGSSRHVFPVKRRRSGGSGG
                                    :.   : : ::* :   *.:**. *: ** ** *   *  

AT2G34140.1     QSC----------------------
pt024374_POPTR_ QNCW---------------------
gm012581_Glyma0 HESQRKFVIIHEITEHPNQIETKEA
pt019779_POPTR_ HTC----------------------
                : .
BoxShade v3.31 C (beta, 970507) Output
AT2G34140.1     - - - - M A T Q D S Q G I K L F G K T I A F N T R T I K N E E E T H P P E Q E A T I A V R S S S S S D L T A E - K R P D
pt024374_POPTR_    - - - - M A S Q E - E G I K L F G A T I T L H D G Q V I S K E D - - - - - - - - - - - - - - Q N K E N P T I D - K R P E
gm012581_Glyma0    M A E A Q S G Q A S E G I K L F G T T I T L H G R E - - R K E D - - - - - - - - - - - - - R N D S E D G T E E I K R P D
pt019779_POPTR_    - - - - M A S Q E - E G I K L F G A T I T L H D K Q E G N K E D - - - - - - - - - - - - - - P N K E N P T T D - K R P E
 
AT2G34140.1     K I I A C P R C K S M E T K F C Y F N N Y N V N Q P R H F C K G C H R Y W T A G G A L R N V P V G A G R R K S K P P G R
pt024374_POPTR_    K I I Q C P R C K S M E T K F C Y F N N Y N V N Q P R H F C K G C Q R Y W T A G G A L R N V P V G A G R R K T K P P G R
gm012581_Glyma0    K I I P C P R C K S M E T K F C Y F N N Y N V N Q P R H F C K G C Q R Y W T A G G A L R N V P V G A G R R K V K P - - -
pt019779_POPTR_    K V I P C P R C K S M E T K F C Y F N N Y N V N Q P R Y F C K G C Q R Y W T A G G A L R N V P V G A G R R K T K P P G R
 
AT2G34140.1     V V V G - - - - - M L G D G N - G V - R Q V E L I N G L L V E E W Q H A A A A A H G S F R H D F P M K R L R C - Y S D G
pt024374_POPTR_    G G P G G Y S E E C L F D G S G G V I H Q F E L - D G V V L E E L H - - L A T T H G G F R Q V F P V K R R R S G G S G G
gm012581_Glyma0    - - - - - - - - - - - - - - - - - - - - Q F G Q E E R L A L D E W H - V A A V A H G D F R Q L F P S K R R R M - S S A Q
pt019779_POPTR_    V G L D G Y S E G C L Y D G S G G V - H R F E L - D G M V L E E W H - - L A T T H G S S R H V F P V K R R R S G G S G G
 
AT2G34140.1     Q S C - - - - - - - - - - - - - - - - - - - - - -
pt024374_POPTR_    Q N C W - - - - - - - - - - - - - - - - - - - - -
gm012581_Glyma0    H E S Q R K F V I I H E I T E H P N Q I E T K E A
pt019779_POPTR_    H T C - - - - - - - - - - - - - - - - - - - - - -
 
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