fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G34140.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt019779 not found in 159aa AT1G29160.1 1st_not 0.506963788 II
Pt024374 not found in 161aa AT1G29160.1 not_not 0.484679665 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G34140.1     MATQDSQGIKLFGKTIAFNTRTIKNEEETHPPEQEATIAVRSSSSSDLTAEKRPDKIIAC
pt024374_POPTR_ MASQE-EGIKLFGATITLHDGQVISKED--------------QNKENPTIDKRPEKIIQC
pt019779_POPTR_ MASQE-EGIKLFGATITLHDKQEGNKED--------------PNKENPTTDKRPEKVIPC
                **:*: :****** **:::     .:*:               ...: * :***:*:* *

AT2G34140.1     PRCKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSKPPGRVVVG-
pt024374_POPTR_ PRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKPPGRGGPGG
pt019779_POPTR_ PRCKSMETKFCYFNNYNVNQPRYFCKGCQRYWTAGGALRNVPVGAGRRKTKPPGRVGLDG
                **********************:*****:********************:*****   . 

AT2G34140.1     ----MLGDGN-GV-RQVELINGLLVEEWQHAAAAAHGSFRHDFPMKRLRC-YSDGQSC-
pt024374_POPTR_ YSEECLFDGSGGVIHQFEL-DGVVLEELH--LATTHGGFRQVFPVKRRRSGGSGGQNCW
pt019779_POPTR_ YSEGCLYDGSGGV-HRFEL-DGMVLEEWH--LATTHGSSRHVFPVKRRRSGGSGGHTC-
                     * **. ** ::.** :*:::** :   *::**. *: **:** *.  *.*:.*
BoxShade v3.31 C (beta, 970507) Output
AT2G34140.1     M A T Q D S Q G I K L F G K T I A F N T R T I K N E E E T H P P E Q E A T I A V R S S S S S D L T A E K R P D K I I A C
pt024374_POPTR_    M A S Q E - E G I K L F G A T I T L H D G Q V I S K E D - - - - - - - - - - - - - - Q N K E N P T I D K R P E K I I Q C
pt019779_POPTR_    M A S Q E - E G I K L F G A T I T L H D K Q E G N K E D - - - - - - - - - - - - - - P N K E N P T T D K R P E K V I P C
 
AT2G34140.1     P R C K S M E T K F C Y F N N Y N V N Q P R H F C K G C H R Y W T A G G A L R N V P V G A G R R K S K P P G R V V V G -
pt024374_POPTR_    P R C K S M E T K F C Y F N N Y N V N Q P R H F C K G C Q R Y W T A G G A L R N V P V G A G R R K T K P P G R G G P G G
pt019779_POPTR_    P R C K S M E T K F C Y F N N Y N V N Q P R Y F C K G C Q R Y W T A G G A L R N V P V G A G R R K T K P P G R V G L D G
 
AT2G34140.1     - - - - M L G D G N - G V - R Q V E L I N G L L V E E W Q H A A A A A H G S F R H D F P M K R L R C - Y S D G Q S C -
pt024374_POPTR_    Y S E E C L F D G S G G V I H Q F E L - D G V V L E E L H - - L A T T H G G F R Q V F P V K R R R S G G S G G Q N C W
pt019779_POPTR_    Y S E G C L Y D G S G G V - H R F E L - D G M V L E E W H - - L A T T H G S S R H V F P V K R R R S G G S G G H T C -
 
0