fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G34140.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm012581 not found in 165aa AT1G29160.1 1st_not 0.456824512 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G34140.1     ----MATQDSQGIKLFGKTIAFNTRTIKNEEETHPPEQEATIAVRSSSSSDLTAE-KRPD
gm012581_Glyma0 MAEAQSGQASEGIKLFGTTITLHGRERKEDR---------------NDSEDGTEEIKRPD
                     : * *:******.**::: *  *::.               ..*.* * * ****

AT2G34140.1     KIIACPRCKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSKPPGR
gm012581_Glyma0 KIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKVKP---
                ***.*****************************:******************** **   

AT2G34140.1     VVVGMLGDGNGVRQVELINGLLVEEWQHAAAAAHGSFRHDFPMKRLRCYSDGQSC-----
gm012581_Glyma0 -------------QFGQEERLALDEW-HVAAVAHGDFRQLFPSKRRRMSSAQHESQRKFV
                             *.   : * ::** *.**.***.**: ** ** *  *  :..     

AT2G34140.1     -----------------
gm012581_Glyma0 IIHEITEHPNQIETKEA
BoxShade v3.31 C (beta, 970507) Output
AT2G34140.1     - - - - M A T Q D S Q G I K L F G K T I A F N T R T I K N E E E T H P P E Q E A T I A V R S S S S S D L T A E - K R P D
gm012581_Glyma0    M A E A Q S G Q A S E G I K L F G T T I T L H G R E R K E D R - - - - - - - - - - - - - - - N D S E D G T E E I K R P D
 
AT2G34140.1     K I I A C P R C K S M E T K F C Y F N N Y N V N Q P R H F C K G C H R Y W T A G G A L R N V P V G A G R R K S K P P G R
gm012581_Glyma0    K I I P C P R C K S M E T K F C Y F N N Y N V N Q P R H F C K G C Q R Y W T A G G A L R N V P V G A G R R K V K P - - -
 
AT2G34140.1     V V V G M L G D G N G V R Q V E L I N G L L V E E W Q H A A A A A H G S F R H D F P M K R L R C Y S D G Q S C - - - - -
gm012581_Glyma0    - - - - - - - - - - - - - Q F G Q E E R L A L D E W - H V A A V A H G D F R Q L F P S K R R R M S S A Q H E S Q R K F V
 
AT2G34140.1     - - - - - - - - - - - - - - - - -
gm012581_Glyma0    I I H E I T E H P N Q I E T K E A
 
0