fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G34440.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt018238 not found in 178aa AT2G34440.1 1st_1st 0.487179487 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G34440.1     MGRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKP
pt018238_POPTR_ MGRRKIEIEMVKDSNSRQVTFSKRRTGVFKKANELATLCGVQIAIIVFSPGGKPFSFGHP
                ******::***:* *:***********:****.******..::.*:**********:*:*

AT2G34440.1     NLDSVAERFM-REYDDSDSGDEEKSGNYRPKLKRLSERLDLLNQEVEAEKERGEKSQEKL
pt018238_POPTR_ NVEFVAQRFLNRDKKPKVSAGSLVDSQQEARLEKLNSQLNDILRKLQYERKRGELLEKAM
                *:: **:**: *: . . *...  ..: ..:*::*..:*: : :::: *::***  :: :

AT2G34440.1     ESAGDERFKESIETLTLDELNEYKDRLQTVHGRIEGQVNHLQASSCLMLLSRK-------
pt018238_POPTR_ KLKGSE--PKLIGELNLDELRKMKGELEELQEKLRGRVTEMEASSSLLLLSKKPTREKHQ
                :  *.*   : *  *.****.: *..*: :: ::.*:*..::***.*:***:*
BoxShade v3.31 C (beta, 970507) Output
AT2G34440.1     M G R R K I K M E M V Q D M N T R Q V T F S K R R T G L F K K A S E L A T L C N A E L G I V V F S P G G K P F S Y G K P
pt018238_POPTR_    M G R R K I E I E M V K D S N S R Q V T F S K R R T G V F K K A N E L A T L C G V Q I A I I V F S P G G K P F S F G H P
 
AT2G34440.1     N L D S V A E R F M - R E Y D D S D S G D E E K S G N Y R P K L K R L S E R L D L L N Q E V E A E K E R G E K S Q E K L
pt018238_POPTR_    N V E F V A Q R F L N R D K K P K V S A G S L V D S Q Q E A R L E K L N S Q L N D I L R K L Q Y E R K R G E L L E K A M
 
AT2G34440.1     E S A G D E R F K E S I E T L T L D E L N E Y K D R L Q T V H G R I E G Q V N H L Q A S S C L M L L S R K - - - - - - -
pt018238_POPTR_    K L K G S E - - P K L I G E L N L D E L R K M K G E L E E L Q E K L R G R V T E M E A S S S L L L L S K K P T R E K H Q
 
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