fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G34720.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm023847 not found in 204aa AT1G30500.2 1st_not 0.472906403 II
Pt024440 not found in 208aa AT1G30500.2 1st_not 0.480295566 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G34720.1     MTSSVHELSDNNESHAKKERPDSQTRPQV-PSGRSSESIDT-NSVYSEP--------MAH
gm023847_Glyma0 MTST-HDLSDN-EADDQQQ-SESQMEPLS-ANGISYAGIATQNVQYATPSQLGTGHAVVP
pt024440_POPTR_ MTSSVHDLSDNSEAGEQQKHSEPQVQTSSPANALAHPGISPPNFQYATP-QLGAGHAMAP
                ***: *:**** *:  ::: .:.* ..   ... :  .* . *  *: *        :. 

AT2G34720.1     GLYPYPDPYYRSVFA---QQAYLPHPY---PGVQLQLMGMQQPGVPLQCDAVEEPVFVNA
gm023847_Glyma0 PTYPYPDPYYRSIFAPYDAQTYPPQPYGGNPMVHLQLMGIQQAGVPLPTDTVEEPVFVNA
pt024440_POPTR_ AAYPYPDPYYRSIFAPCDAQPYAPQPYGAQPMVHLQLMGIQQAGVPLPSDAVEEPVFVNA
                  **********:**    *.* *:**   * *:*****:**.****  *:*********

AT2G34720.1     KQYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGDHK
gm023847_Glyma0 KQYHGILRRRQSRAKAESEKKAARNRKPYLHESRHLHALRRARGCGGRFLNSKKD--ENQ
pt024440_POPTR_ KQYHGILRRRQSRAKAESENKAIKSRKPYLHESRHQHALKRARGCGGRFLNSKKK--ENQ
                *************** *:.::* : :***:***** **::*.*********:**.  :::

AT2G34720.1     EEE-EATSDENTSEASSSLRSEKLAMATSGPNGRS
gm023847_Glyma0 QDE-VASTDE--SQSTINLNSDKNELAPSDRTS--
pt024440_POPTR_ QQNGMAPGDK--SQSNVNLNANKNDIASLDDKS--
                :::  *. *:  *::. .*.::*  :*. . ..
BoxShade v3.31 C (beta, 970507) Output
AT2G34720.1     M T S S V H E L S D N N E S H A K K E R P D S Q T R P Q V - P S G R S S E S I D T - N S V Y S E P - - - - - - - - M A H
gm023847_Glyma0    M T S T - H D L S D N - E A D D Q Q Q - S E S Q M E P L S - A N G I S Y A G I A T Q N V Q Y A T P S Q L G T G H A V V P
pt024440_POPTR_    M T S S V H D L S D N S E A G E Q Q K H S E P Q V Q T S S P A N A L A H P G I S P P N F Q Y A T P - Q L G A G H A M A P
 
AT2G34720.1     G L Y P Y P D P Y Y R S V F A - - - Q Q A Y L P H P Y - - - P G V Q L Q L M G M Q Q P G V P L Q C D A V E E P V F V N A
gm023847_Glyma0    P T Y P Y P D P Y Y R S I F A P Y D A Q T Y P P Q P Y G G N P M V H L Q L M G I Q Q A G V P L P T D T V E E P V F V N A
pt024440_POPTR_    A A Y P Y P D P Y Y R S I F A P C D A Q P Y A P Q P Y G A Q P M V H L Q L M G I Q Q A G V P L P S D A V E E P V F V N A
 
AT2G34720.1     K Q Y H G I L R R R Q S R A K L E A R N R A I K A K K P Y M H E S R H L H A I R R P R G C G G R F L N A K K E N G D H K
gm023847_Glyma0    K Q Y H G I L R R R Q S R A K A E S E K K A A R N R K P Y L H E S R H L H A L R R A R G C G G R F L N S K K D - - E N Q
pt024440_POPTR_    K Q Y H G I L R R R Q S R A K A E S E N K A I K S R K P Y L H E S R H Q H A L K R A R G C G G R F L N S K K K - - E N Q
 
AT2G34720.1     E E E - E A T S D E N T S E A S S S L R S E K L A M A T S G P N G R S
gm023847_Glyma0    Q D E - V A S T D E - - S Q S T I N L N S D K N E L A P S D R T S - -
pt024440_POPTR_    Q Q N G M A P G D K - - S Q S N V N L N A N K N D I A S L D D K S - -
 
0