fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G34720.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt024440 not found in 208aa AT1G30500.2 1st_not 0.480295566 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G34720.1     MTSSVHELSDNNESHAKKERPDSQTRPQVPSGRSSESI------DTNSVYSEP-------
pt024440_POPTR_ MTSSVHDLSDNSEAGEQQK----HSEPQVQTSSPANALAHPGISPPNFQYATPQLGAGHA
                ******:****.*:  :::    ::.*** :. .::::       .*  *: *       

AT2G34720.1     MAHGLYPYPDPYYRSVFA---QQAYLPHPY---PGVQLQLMGMQQPGVPLQCDAVEEPVF
pt024440_POPTR_ MAPAAYPYPDPYYRSIFAPCDAQPYAPQPYGAQPMVHLQLMGIQQAGVPLPSDAVEEPVF
                ** . **********:**    *.* *:**   * *:*****:**.**** .********

AT2G34720.1     VNAKQYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENG
pt024440_POPTR_ VNAKQYHGILRRRQSRAKAESENKAIKSRKPYLHESRHQHALKRARGCGGRFLNSKKK--
                ****************** *:.*:***::***:***** **::*.*********:**:  

AT2G34720.1     DHKEEEEATSDENTSEASSSLRSEKLAMATSGPNGRS
pt024440_POPTR_ -ENQQQNGMAPGDKSQSNVNLNANKNDIASLDDKS--
                 .:::::. :  :.*::. .*.::*  :*: . :.
BoxShade v3.31 C (beta, 970507) Output
AT2G34720.1     M T S S V H E L S D N N E S H A K K E R P D S Q T R P Q V P S G R S S E S I - - - - - - D T N S V Y S E P - - - - - - -
pt024440_POPTR_    M T S S V H D L S D N S E A G E Q Q K - - - - H S E P Q V Q T S S P A N A L A H P G I S P P N F Q Y A T P Q L G A G H A
 
AT2G34720.1     M A H G L Y P Y P D P Y Y R S V F A - - - Q Q A Y L P H P Y - - - P G V Q L Q L M G M Q Q P G V P L Q C D A V E E P V F
pt024440_POPTR_    M A P A A Y P Y P D P Y Y R S I F A P C D A Q P Y A P Q P Y G A Q P M V H L Q L M G I Q Q A G V P L P S D A V E E P V F
 
AT2G34720.1     V N A K Q Y H G I L R R R Q S R A K L E A R N R A I K A K K P Y M H E S R H L H A I R R P R G C G G R F L N A K K E N G
pt024440_POPTR_    V N A K Q Y H G I L R R R Q S R A K A E S E N K A I K S R K P Y L H E S R H Q H A L K R A R G C G G R F L N S K K K - -
 
AT2G34720.1     D H K E E E E A T S D E N T S E A S S S L R S E K L A M A T S G P N G R S
pt024440_POPTR_    - E N Q Q Q N G M A P G D K S Q S N V N L N A N K N D I A S L D D K S - -
 
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