Input
| Putative repression domain
|
|
AT2G34720.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt028622 |
not found in 205aa |
AT1G30500.2 |
not_not |
0.470443349 |
III |
Pt028621 |
not found in 223aa |
AT1G30500.2 |
not_not |
0.467980295 |
III |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT2G34720.1 -------------MTSSVHELS----DNNESHAKKERPDSQTRPQVPS-GRSSESIDTNS
pt028621_POPTR_ MRFEFGDSVCITAMTSSLHDLSAGCPDNSEADEQQNESEPQIQSSSPAMAQAHPGFSTPN
pt028622_POPTR_ MRFEFGDSVCITAMTSSLHDLS----DNSEADEQQNESEPQIQSSSPAMAQAHPGFSTPN
****:*:** **.*:. :::..:.* :.. *: .:: .:.* .
AT2G34720.1 V-YSEP-------MAHGLYPYPDPYYRSVFA---QQAYLPHPY---PGVQLQLMGMQQPG
pt028621_POPTR_ VQYATPQLGAGHAMAPATYPYPDPYYRSIFAPYDPQPYPPQPYGAQPMVHLQLMGIQQAG
pt028622_POPTR_ VQYATPQLGAGHAMAPATYPYPDPYYRSIFAPYDPQPYPPQPYGAQPMVHLQLMGIQQAG
* *: * ** . **********:** *.* *:** * *:*****:**.*
AT2G34720.1 VPLQCDAVEEPVFVNAKQYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRG
pt028621_POPTR_ VPLPSDAVEEPVFVNAKQYHGILRRRQSRAKAESESKAIKSRKPYLHESRHQHALKRARG
pt028622_POPTR_ VPLPSDAVEEPVFVNAKQYHGILRRRQSRAKAESESKAIKSRKPYLHESRHQHALKRARG
*** .************************** *:..:***::***:***** **::*.**
AT2G34720.1 CGGRFLNAKKENGDHKEEEEATSDENTSEASSSLRSEKLAMATSGPNGRS
pt028621_POPTR_ CGGRFLNSKKQ--ENQEHNGVASG-DKSQSNINLNSDKNDIVSSND----
pt028622_POPTR_ CGGRFLNSKKQ--ENQEHNGVASGSDGGAHN-------------------
*******:**: :::*.: .:*. : . .
BoxShade v3.31 C (beta, 970507) Output
AT2G34720.1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
T |
S |
S |
V |
H |
E |
L |
S |
- |
- |
- |
- |
D |
N |
N |
E |
S |
H |
A |
K |
K |
E |
R |
P |
D |
S |
Q |
T |
R |
P |
Q |
V |
P |
S |
- |
G |
R |
S |
S |
E |
S |
I |
D |
T |
N |
S |
pt028621_POPTR_ |
M |
R |
F |
E |
F |
G |
D |
S |
V |
C |
I |
T |
A |
M |
T |
S |
S |
L |
H |
D |
L |
S |
A |
G |
C |
P |
D |
N |
S |
E |
A |
D |
E |
Q |
Q |
N |
E |
S |
E |
P |
Q |
I |
Q |
S |
S |
S |
P |
A |
M |
A |
Q |
A |
H |
P |
G |
F |
S |
T |
P |
N |
pt028622_POPTR_ |
M |
R |
F |
E |
F |
G |
D |
S |
V |
C |
I |
T |
A |
M |
T |
S |
S |
L |
H |
D |
L |
S |
- |
- |
- |
- |
D |
N |
S |
E |
A |
D |
E |
Q |
Q |
N |
E |
S |
E |
P |
Q |
I |
Q |
S |
S |
S |
P |
A |
M |
A |
Q |
A |
H |
P |
G |
F |
S |
T |
P |
N |
|
AT2G34720.1 |
V |
- |
Y |
S |
E |
P |
- |
- |
- |
- |
- |
- |
- |
M |
A |
H |
G |
L |
Y |
P |
Y |
P |
D |
P |
Y |
Y |
R |
S |
V |
F |
A |
- |
- |
- |
Q |
Q |
A |
Y |
L |
P |
H |
P |
Y |
- |
- |
- |
P |
G |
V |
Q |
L |
Q |
L |
M |
G |
M |
Q |
Q |
P |
G |
pt028621_POPTR_ |
V |
Q |
Y |
A |
T |
P |
Q |
L |
G |
A |
G |
H |
A |
M |
A |
P |
A |
T |
Y |
P |
Y |
P |
D |
P |
Y |
Y |
R |
S |
I |
F |
A |
P |
Y |
D |
P |
Q |
P |
Y |
P |
P |
Q |
P |
Y |
G |
A |
Q |
P |
M |
V |
H |
L |
Q |
L |
M |
G |
I |
Q |
Q |
A |
G |
pt028622_POPTR_ |
V |
Q |
Y |
A |
T |
P |
Q |
L |
G |
A |
G |
H |
A |
M |
A |
P |
A |
T |
Y |
P |
Y |
P |
D |
P |
Y |
Y |
R |
S |
I |
F |
A |
P |
Y |
D |
P |
Q |
P |
Y |
P |
P |
Q |
P |
Y |
G |
A |
Q |
P |
M |
V |
H |
L |
Q |
L |
M |
G |
I |
Q |
Q |
A |
G |
|
AT2G34720.1 |
V |
P |
L |
Q |
C |
D |
A |
V |
E |
E |
P |
V |
F |
V |
N |
A |
K |
Q |
Y |
H |
G |
I |
L |
R |
R |
R |
Q |
S |
R |
A |
K |
L |
E |
A |
R |
N |
R |
A |
I |
K |
A |
K |
K |
P |
Y |
M |
H |
E |
S |
R |
H |
L |
H |
A |
I |
R |
R |
P |
R |
G |
pt028621_POPTR_ |
V |
P |
L |
P |
S |
D |
A |
V |
E |
E |
P |
V |
F |
V |
N |
A |
K |
Q |
Y |
H |
G |
I |
L |
R |
R |
R |
Q |
S |
R |
A |
K |
A |
E |
S |
E |
S |
K |
A |
I |
K |
S |
R |
K |
P |
Y |
L |
H |
E |
S |
R |
H |
Q |
H |
A |
L |
K |
R |
A |
R |
G |
pt028622_POPTR_ |
V |
P |
L |
P |
S |
D |
A |
V |
E |
E |
P |
V |
F |
V |
N |
A |
K |
Q |
Y |
H |
G |
I |
L |
R |
R |
R |
Q |
S |
R |
A |
K |
A |
E |
S |
E |
S |
K |
A |
I |
K |
S |
R |
K |
P |
Y |
L |
H |
E |
S |
R |
H |
Q |
H |
A |
L |
K |
R |
A |
R |
G |
|
AT2G34720.1 |
C |
G |
G |
R |
F |
L |
N |
A |
K |
K |
E |
N |
G |
D |
H |
K |
E |
E |
E |
E |
A |
T |
S |
D |
E |
N |
T |
S |
E |
A |
S |
S |
S |
L |
R |
S |
E |
K |
L |
A |
M |
A |
T |
S |
G |
P |
N |
G |
R |
S |
pt028621_POPTR_ |
C |
G |
G |
R |
F |
L |
N |
S |
K |
K |
Q |
- |
- |
E |
N |
Q |
E |
H |
N |
G |
V |
A |
S |
G |
- |
D |
K |
S |
Q |
S |
N |
I |
N |
L |
N |
S |
D |
K |
N |
D |
I |
V |
S |
S |
N |
D |
- |
- |
- |
- |
pt028622_POPTR_ |
C |
G |
G |
R |
F |
L |
N |
S |
K |
K |
Q |
- |
- |
E |
N |
Q |
E |
H |
N |
G |
V |
A |
S |
G |
S |
D |
G |
G |
A |
H |
N |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
|
|