fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G34720.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt024440 not found in 208aa AT1G30500.2 1st_not 0.480295566 II
Pt028622 not found in 205aa AT1G30500.2 not_not 0.470443349 III
Pt028621 not found in 223aa AT1G30500.2 not_not 0.467980295 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G34720.1     -------------MTSSVHELS----DNNESHAKKERPDSQTRPQVPS-GRSSESIDT-N
pt024440_POPTR_ -------------MTSSVHDLS----DNSEAGEQQKHSEPQVQTSSPANALAHPGISPPN
pt028621_POPTR_ MRFEFGDSVCITAMTSSLHDLSAGCPDNSEADEQQNESEPQIQSSSPAMAQAHPGFSTPN
pt028622_POPTR_ MRFEFGDSVCITAMTSSLHDLS----DNSEADEQQNESEPQIQSSSPAMAQAHPGFSTPN
                             ****:*:**    **.*:  :::..:.* :.. *: . :  .:.. *

AT2G34720.1     SVYSEP-------MAHGLYPYPDPYYRSVFA---QQAYLPHPY---PGVQLQLMGMQQPG
pt024440_POPTR_ FQYATPQLGAGHAMAPAAYPYPDPYYRSIFAPCDAQPYAPQPYGAQPMVHLQLMGIQQAG
pt028621_POPTR_ VQYATPQLGAGHAMAPATYPYPDPYYRSIFAPYDPQPYPPQPYGAQPMVHLQLMGIQQAG
pt028622_POPTR_ VQYATPQLGAGHAMAPATYPYPDPYYRSIFAPYDPQPYPPQPYGAQPMVHLQLMGIQQAG
                  *: *       ** . **********:**    *.* *:**   * *:*****:**.*

AT2G34720.1     VPLQCDAVEEPVFVNAKQYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRG
pt024440_POPTR_ VPLPSDAVEEPVFVNAKQYHGILRRRQSRAKAESENKAIKSRKPYLHESRHQHALKRARG
pt028621_POPTR_ VPLPSDAVEEPVFVNAKQYHGILRRRQSRAKAESESKAIKSRKPYLHESRHQHALKRARG
pt028622_POPTR_ VPLPSDAVEEPVFVNAKQYHGILRRRQSRAKAESESKAIKSRKPYLHESRHQHALKRARG
                *** .************************** *:..:***::***:***** **::*.**

AT2G34720.1     CGGRFLNAKKENGDHKEEEEATSDENTSEASSSLRSEKLAMATSGPNGRS
pt024440_POPTR_ CGGRFLNSKKK--ENQQQNGMAPG-DKSQSNVNLNANKNDIASLDDKS--
pt028621_POPTR_ CGGRFLNSKKQ--ENQEHNGVASG-DKSQSNINLNSDKNDIVSSND----
pt028622_POPTR_ CGGRFLNSKKQ--ENQEHNGVASGSDGGAHN-------------------
                *******:**:  ::::.:  :.. : .  .
BoxShade v3.31 C (beta, 970507) Output
AT2G34720.1     - - - - - - - - - - - - - M T S S V H E L S - - - - D N N E S H A K K E R P D S Q T R P Q V P S - G R S S E S I D T - N
pt024440_POPTR_    - - - - - - - - - - - - - M T S S V H D L S - - - - D N S E A G E Q Q K H S E P Q V Q T S S P A N A L A H P G I S P P N
pt028621_POPTR_    M R F E F G D S V C I T A M T S S L H D L S A G C P D N S E A D E Q Q N E S E P Q I Q S S S P A M A Q A H P G F S T P N
pt028622_POPTR_    M R F E F G D S V C I T A M T S S L H D L S - - - - D N S E A D E Q Q N E S E P Q I Q S S S P A M A Q A H P G F S T P N
 
AT2G34720.1     S V Y S E P - - - - - - - M A H G L Y P Y P D P Y Y R S V F A - - - Q Q A Y L P H P Y - - - P G V Q L Q L M G M Q Q P G
pt024440_POPTR_    F Q Y A T P Q L G A G H A M A P A A Y P Y P D P Y Y R S I F A P C D A Q P Y A P Q P Y G A Q P M V H L Q L M G I Q Q A G
pt028621_POPTR_    V Q Y A T P Q L G A G H A M A P A T Y P Y P D P Y Y R S I F A P Y D P Q P Y P P Q P Y G A Q P M V H L Q L M G I Q Q A G
pt028622_POPTR_    V Q Y A T P Q L G A G H A M A P A T Y P Y P D P Y Y R S I F A P Y D P Q P Y P P Q P Y G A Q P M V H L Q L M G I Q Q A G
 
AT2G34720.1     V P L Q C D A V E E P V F V N A K Q Y H G I L R R R Q S R A K L E A R N R A I K A K K P Y M H E S R H L H A I R R P R G
pt024440_POPTR_    V P L P S D A V E E P V F V N A K Q Y H G I L R R R Q S R A K A E S E N K A I K S R K P Y L H E S R H Q H A L K R A R G
pt028621_POPTR_    V P L P S D A V E E P V F V N A K Q Y H G I L R R R Q S R A K A E S E S K A I K S R K P Y L H E S R H Q H A L K R A R G
pt028622_POPTR_    V P L P S D A V E E P V F V N A K Q Y H G I L R R R Q S R A K A E S E S K A I K S R K P Y L H E S R H Q H A L K R A R G
 
AT2G34720.1     C G G R F L N A K K E N G D H K E E E E A T S D E N T S E A S S S L R S E K L A M A T S G P N G R S
pt024440_POPTR_    C G G R F L N S K K K - - E N Q Q Q N G M A P G - D K S Q S N V N L N A N K N D I A S L D D K S - -
pt028621_POPTR_    C G G R F L N S K K Q - - E N Q E H N G V A S G - D K S Q S N I N L N S D K N D I V S S N D - - - -
pt028622_POPTR_    C G G R F L N S K K Q - - E N Q E H N G V A S G S D G G A H N - - - - - - - - - - - - - - - - - - -
 
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