fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G34720.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm023847 not found in 204aa AT1G30500.2 1st_not 0.472906403 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G34720.1     MTSSVHELSDNNESHAKKERPDSQTRPQVPSGRSSESIDTNSV-YSEPMAHG--------
gm023847_Glyma0 MTST-HDLSDNEAD--DQQQSESQMEPLSANGISYAGIATQNVQYATPSQLGTGHAVVPP
                ***: *:****: .  .:::.:** .*  ..* *  .* *:.* *: *   *        

AT2G34720.1     LYPYPDPYYRSVFA---QQAYLPHPY---PGVQLQLMGMQQPGVPLQCDAVEEPVFVNAK
gm023847_Glyma0 TYPYPDPYYRSIFAPYDAQTYPPQPYGGNPMVHLQLMGIQQAGVPLPTDTVEEPVFVNAK
                 **********:**    *:* *:**   * *:*****:**.****  *:**********

AT2G34720.1     QYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGDHKE
gm023847_Glyma0 QYHGILRRRQSRAKAESEKKAARNRKPYLHESRHLHALRRARGCGGRFLNSKKD--ENQQ
                ************** *:.::* : :***:********:**.*********:**:  ::::

AT2G34720.1     EEEATSDENTSEASSSLRSEKLAMATSGPNGRS-
gm023847_Glyma0 DEVASTDE--SQSTINLNSDKNELA---PSDRTS
                :* *::**  *::: .*.*:*  :*   *..*:
BoxShade v3.31 C (beta, 970507) Output
AT2G34720.1     M T S S V H E L S D N N E S H A K K E R P D S Q T R P Q V P S G R S S E S I D T N S V - Y S E P M A H G - - - - - - - -
gm023847_Glyma0    M T S T - H D L S D N E A D - - D Q Q Q S E S Q M E P L S A N G I S Y A G I A T Q N V Q Y A T P S Q L G T G H A V V P P
 
AT2G34720.1     L Y P Y P D P Y Y R S V F A - - - Q Q A Y L P H P Y - - - P G V Q L Q L M G M Q Q P G V P L Q C D A V E E P V F V N A K
gm023847_Glyma0    T Y P Y P D P Y Y R S I F A P Y D A Q T Y P P Q P Y G G N P M V H L Q L M G I Q Q A G V P L P T D T V E E P V F V N A K
 
AT2G34720.1     Q Y H G I L R R R Q S R A K L E A R N R A I K A K K P Y M H E S R H L H A I R R P R G C G G R F L N A K K E N G D H K E
gm023847_Glyma0    Q Y H G I L R R R Q S R A K A E S E K K A A R N R K P Y L H E S R H L H A L R R A R G C G G R F L N S K K D - - E N Q Q
 
AT2G34720.1     E E E A T S D E N T S E A S S S L R S E K L A M A T S G P N G R S -
gm023847_Glyma0    D E V A S T D E - - S Q S T I N L N S D K N E L A - - - P S D R T S
 
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