fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G35270.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt032727 not found in 298aa AT4G17800.1 1st_not 0.697115384 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G35270.1     MAGLDLGTTSRYVHNVD--------------------------GGGGGQFTTDNHHEDDG
pt032727_POPTR_ MAGLDLGTTSRYVHQLHHRPDLHLQHQPDPEDHDSNRAGGGLGGGSGGHFSTDHHH-DDG
                **************::.                          **.**:*:**:** ***

AT2G35270.1     GAGGNHHHHHHNHNHHQGLDLIASNDNSGLGGGGGGGSGDLVMRRPRGRPAGSKNKPKPP
pt032727_POPTR_ S--------------HQGLDLVAAAANS--------GQGDLVGRRPRGRPAGSKNKPKPP
                .              ******:*:  **        *.**** *****************

AT2G35270.1     VIVTRESANTLRAHILEVGSGCDVFECISTYARRRQRGICVLSGTGTVTNVSIRQPTAAG
pt032727_POPTR_ VIITRESANTLRAHILEVGNGCDVFECVANYARRRQRGICILSGAGTVTNVSIRQPAAAG
                **:****************.*******::.**********:***:***********:***

AT2G35270.1     AVVTLRGTFEILSLSGSFLPPPAPPGATSLTIFLAGAQGQVVGGNVVGELMAAGPVMVMA
pt032727_POPTR_ AIVTLHGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGSVVGELTAAGPVIVIA
                *:***:* ****************************.*******.***** *****:*:*

AT2G35270.1     ASFTNVAYERLPLDEHEE-HLQSGGGGGGGNMYSEATGGG-------------GGLPFFN
pt032727_POPTR_ ASFTNVAYERLPLDEDDQLQMQSGGGGGGG-----AGGGGVGNSPFNESGTPSGGLPFFN
                ***************.:: ::*********     * ***             *******

AT2G35270.1     LPMSMP---QIGVESWQGNHAGAGRAPF
pt032727_POPTR_ LPLNMTANVQLPVDGWGGN--SGGRVPF
                **:.*.   *: *:.* **  ..**.**
BoxShade v3.31 C (beta, 970507) Output
AT2G35270.1     M A G L D L G T T S R Y V H N V D - - - - - - - - - - - - - - - - - - - - - - - - - - G G G G G Q F T T D N H H E D D G
pt032727_POPTR_    M A G L D L G T T S R Y V H Q L H H R P D L H L Q H Q P D P E D H D S N R A G G G L G G G S G G H F S T D H H H - D D G
 
AT2G35270.1     G A G G N H H H H H H N H N H H Q G L D L I A S N D N S G L G G G G G G G S G D L V M R R P R G R P A G S K N K P K P P
pt032727_POPTR_    S - - - - - - - - - - - - - - H Q G L D L V A A A A N S - - - - - - - - G Q G D L V G R R P R G R P A G S K N K P K P P
 
AT2G35270.1     V I V T R E S A N T L R A H I L E V G S G C D V F E C I S T Y A R R R Q R G I C V L S G T G T V T N V S I R Q P T A A G
pt032727_POPTR_    V I I T R E S A N T L R A H I L E V G N G C D V F E C V A N Y A R R R Q R G I C I L S G A G T V T N V S I R Q P A A A G
 
AT2G35270.1     A V V T L R G T F E I L S L S G S F L P P P A P P G A T S L T I F L A G A Q G Q V V G G N V V G E L M A A G P V M V M A
pt032727_POPTR_    A I V T L H G R F E I L S L S G S F L P P P A P P G A T S L T I F L A G G Q G Q V V G G S V V G E L T A A G P V I V I A
 
AT2G35270.1     A S F T N V A Y E R L P L D E H E E - H L Q S G G G G G G G N M Y S E A T G G G - - - - - - - - - - - - - G G L P F F N
pt032727_POPTR_    A S F T N V A Y E R L P L D E D D Q L Q M Q S G G G G G G G - - - - - A G G G G V G N S P F N E S G T P S G G L P F F N
 
AT2G35270.1     L P M S M P - - - Q I G V E S W Q G N H A G A G R A P F
pt032727_POPTR_    L P L N M T A N V Q L P V D G W G G N - - S G G R V P F
 
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