fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G35270.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm029807 not found in 250aa AT4G17800.1 1st_not 0.639423076 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G35270.1     MAGLDLGTTSRYVHNVDGGGGGQFTTDNHHEDDGGAGGNHHHHHHNHNHHQGLDLIASND
gm029807_Glyma1 MAGLDLSTASPFVQSL------------------------HRPDFNQQHDSGEDAKQSAE
                ******.*:* :*:.:                        *: ..*::*..* *   * :

AT2G35270.1     NSGLGGGGGGGSGDLVMRRPRGRPAGSKNKPKPPVIVTRESANTLRAHILEVGSGCDVFE
gm029807_Glyma1 D------GPHHQGDVVGRRPRGRPAGSKNKPKPPVIITRESANTLRAHILEVANGCDVFE
                :      *   .**:* *******************:***************..******

AT2G35270.1     CISTYARRRQRGICVLSGTGTVTNVSIRQPTAAGAVVTLRGTFEILSLSGSFLPPPAPPG
gm029807_Glyma1 SVASYARRRQRGICILSGSGTVTNVSLRQPASAGAVVTLHGRFEILSLTGSFLPPPAPPG
                .:::**********:***:*******:***::*******:* ******:***********

AT2G35270.1     ATSLTIFLAGAQGQVVGGNVVGELMAAGPVMVMAASFTNVAYERLPLDEHEEHLQ-SGGG
gm029807_Glyma1 ATSLSIYLAGGQGQVVGGSVVGELIAAGPVIVMAASFTNVAYERLPLEEEEEQVEISGVA
                ****:*:***.*******.*****:*****:****************:*.**::: ** .

AT2G35270.1     GGGGNMYSEATGGGGGLPFFNLPMSMPQIGVESWQGNHAGAGRAPF
gm029807_Glyma1 GNNSNPFPDPS---SGLPFFNLPMNV-QLPVDAWAGN--STTRSPF
                *...* :.:.:   .*********.: *: *::* **  .: *:**
BoxShade v3.31 C (beta, 970507) Output
AT2G35270.1     M A G L D L G T T S R Y V H N V D G G G G G Q F T T D N H H E D D G G A G G N H H H H H H N H N H H Q G L D L I A S N D
gm029807_Glyma1    M A G L D L S T A S P F V Q S L - - - - - - - - - - - - - - - - - - - - - - - - H R P D F N Q Q H D S G E D A K Q S A E
 
AT2G35270.1     N S G L G G G G G G G S G D L V M R R P R G R P A G S K N K P K P P V I V T R E S A N T L R A H I L E V G S G C D V F E
gm029807_Glyma1    D - - - - - - G P H H Q G D V V G R R P R G R P A G S K N K P K P P V I I T R E S A N T L R A H I L E V A N G C D V F E
 
AT2G35270.1     C I S T Y A R R R Q R G I C V L S G T G T V T N V S I R Q P T A A G A V V T L R G T F E I L S L S G S F L P P P A P P G
gm029807_Glyma1    S V A S Y A R R R Q R G I C I L S G S G T V T N V S L R Q P A S A G A V V T L H G R F E I L S L T G S F L P P P A P P G
 
AT2G35270.1     A T S L T I F L A G A Q G Q V V G G N V V G E L M A A G P V M V M A A S F T N V A Y E R L P L D E H E E H L Q - S G G G
gm029807_Glyma1    A T S L S I Y L A G G Q G Q V V G G S V V G E L I A A G P V I V M A A S F T N V A Y E R L P L E E E E E Q V E I S G V A
 
AT2G35270.1     G G G G N M Y S E A T G G G G G L P F F N L P M S M P Q I G V E S W Q G N H A G A G R A P F
gm029807_Glyma1    G N N S N P F P D P S - - - S G L P F F N L P M N V - Q L P V D A W A G N - - S T T R S P F
 
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