fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G35530.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt032742 not found in 401aa AT2G35530.1 1st_1st 0.6 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G35530.1     MASNEMEKSSKEKEPKTPPPSSTAPPSSQEPSSAVSAGMATPDWSGFQAYSPMPPPHGYV
pt032742_POPTR_ MVSSDMDKTGKEKEAK--PPS--AAPTQEQPSTA-SATTVNPDWSGFQAYSPIPPP-GFL
                *.*.:*:*:.****.*  ***  *.*:.::**:* **  ..***********:*** *::

AT2G35530.1     ASSPQPHPYMWGVQHMMPPYGTPPHPYVAMYPPGGMYAHPSMPPGSYPYSPYAMPSPNGM
pt032742_POPTR_ ASSPQAHPYMWGVQHIMPPYGTPPHPYVAMY-PHGVYAHPSIPPGSYPFSPFAMPSPNGI
                *****.*********:*************** * *:*****:******:**:*******:

AT2G35530.1     TEVSGNTTGGTDGDAKQSEVKEKLPIKRSRGSLGSLNMITGKNNEPGKNSGASANGAYSK
pt032742_POPTR_ AEASGNTPGSMEADGRPSDAKEKLPIKRSKGSLGSLNMITGKNNEHGKTTGVSANGAYSK
                :*.****.*. :.*.: *:.*********:*************** **.:*.********

AT2G35530.1     SGESASDGSSEGSDGNSQNDS--GSGLDGKDAEAASENGGSANGPQNGSAGTPILPVSQT
pt032742_POPTR_ SAESGSEGSSEGSDANSQSDSQMKSGGRQDSLEDSSQNGGSAHGAQNGGQGASNTIMNQT
                *.**.*:*******.***.**   **   .. * :*:*****:*.***. *:.   :.**

AT2G35530.1     VPIMPMTAA----GVPGPPTNLNIGMDYWGAPTSAGIPGMHGKV-STPVP-GVVAPGSRD
pt032742_POPTR_ MAIMPISAASAPGAIPGPTTNLNIGMDYWGAPASSTVPAIRGKVPSTPVAGGVVSTGSRD
                :.***::**    .:***.*************:*: :*.::*** ****. ***:.****

AT2G35530.1     GGHSQPWLQDDRELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLNEENTNLRAEIN
pt032742_POPTR_ GVQSQIWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENANLRSEVN
                * :** ****:***********************************.*:***:***:*:*

AT2G35530.1     KLKSQCEELTTENTSLKDQLSLFPPLEGI--SMDNDHQEPDTNQTGAAERKVDSYKDST
pt032742_POPTR_ QIKSEYEQLLAENASLKERLGEVSGQEDFRAGRNDQHMSNDTQQTGQT-----------
                ::**: *:* :**:***::*. ..  *.:  . :::* . **:*** :
BoxShade v3.31 C (beta, 970507) Output
AT2G35530.1     M A S N E M E K S S K E K E P K T P P P S S T A P P S S Q E P S S A V S A G M A T P D W S G F Q A Y S P M P P P H G Y V
pt032742_POPTR_    M V S S D M D K T G K E K E A K - - P P S - - A A P T Q E Q P S T A - S A T T V N P D W S G F Q A Y S P I P P P - G F L
 
AT2G35530.1     A S S P Q P H P Y M W G V Q H M M P P Y G T P P H P Y V A M Y P P G G M Y A H P S M P P G S Y P Y S P Y A M P S P N G M
pt032742_POPTR_    A S S P Q A H P Y M W G V Q H I M P P Y G T P P H P Y V A M Y - P H G V Y A H P S I P P G S Y P F S P F A M P S P N G I
 
AT2G35530.1     T E V S G N T T G G T D G D A K Q S E V K E K L P I K R S R G S L G S L N M I T G K N N E P G K N S G A S A N G A Y S K
pt032742_POPTR_    A E A S G N T P G S M E A D G R P S D A K E K L P I K R S K G S L G S L N M I T G K N N E H G K T T G V S A N G A Y S K
 
AT2G35530.1     S G E S A S D G S S E G S D G N S Q N D S - - G S G L D G K D A E A A S E N G G S A N G P Q N G S A G T P I L P V S Q T
pt032742_POPTR_    S A E S G S E G S S E G S D A N S Q S D S Q M K S G G R Q D S L E D S S Q N G G S A H G A Q N G G Q G A S N T I M N Q T
 
AT2G35530.1     V P I M P M T A A - - - - G V P G P P T N L N I G M D Y W G A P T S A G I P G M H G K V - S T P V P - G V V A P G S R D
pt032742_POPTR_    M A I M P I S A A S A P G A I P G P T T N L N I G M D Y W G A P A S S T V P A I R G K V P S T P V A G G V V S T G S R D
 
AT2G35530.1     G G H S Q P W L Q D D R E L K R Q R R K Q S N R E S A R R S R L R K Q A E C D E L A Q R A E V L N E E N T N L R A E I N
pt032742_POPTR_    G V Q S Q I W L Q D E R E L K R Q R R K Q S N R E S A R R S R L R K Q A E C D E L A Q R A E A L K E E N A N L R S E V N
 
AT2G35530.1     K L K S Q C E E L T T E N T S L K D Q L S L F P P L E G I - - S M D N D H Q E P D T N Q T G A A E R K V D S Y K D S T
pt032742_POPTR_    Q I K S E Y E Q L L A E N A S L K E R L G E V S G Q E D F R A G R N D Q H M S N D T Q Q T G Q T - - - - - - - - - - -
 
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