fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G35700.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt010682 not found in 225aa AT4G16750.1 1st_not 0.532871972 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G35700.1     MERDDCRRFQDSPAQTTERRVKYKPKKKRAKDDDDEKV---VSKHPNFRGVRMRQWGKWV
pt010682_POPTR_ --------MKDSTKQVSQNSSKRNQDPNNYESDKQAKRRGNAGRHPSYRGVRMRQWGKWV
                        ::**. *.::.  * : . :. :.*.: *    ..:**.:************

AT2G35700.1     SEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKD
pt010682_POPTR_ SEIRQPKKKSRIWLGTFSTPEMAARAHDVAALTIKGHSAHLNFPELAHEFPRPASSSPKD
                ****:**************.************:*** **********:.:*****:.***

AT2G35700.1     IQAAAAAAAAAVAIDMDVETSSPSPSPTVTETSSPAMIAL--------------------
pt010682_POPTR_ IQAAAALAA----------TLSCKTSQKGRETEAEAELMLPRSLDSTLASNETQEYSLNS
                ****** **          * * ..* .  **.: * : *                    

AT2G35700.1     -----SDDAFSDLPDLLLNVNHNID------------------GFWDSFPYEEPFL--SQ
pt010682_POPTR_ PLRDDDDDTFIDLPDILQGISHQFDEFCYLSPWQPVGTETSDVGFWH---HEEPSLWEYQ
                     .**:* ****:* .:.*::*                  ***.   :*** *   *

AT2G35700.1     SY----
pt010682_POPTR_ SSRNIY
                *
BoxShade v3.31 C (beta, 970507) Output
AT2G35700.1     M E R D D C R R F Q D S P A Q T T E R R V K Y K P K K K R A K D D D D E K V - - - V S K H P N F R G V R M R Q W G K W V
pt010682_POPTR_    - - - - - - - - M K D S T K Q V S Q N S S K R N Q D P N N Y E S D K Q A K R R G N A G R H P S Y R G V R M R Q W G K W V
 
AT2G35700.1     S E I R E P K K K S R I W L G T F S T A E M A A R A H D V A A L A I K G G S A H L N F P E L A Y H L P R P A S A D P K D
pt010682_POPTR_    S E I R Q P K K K S R I W L G T F S T P E M A A R A H D V A A L T I K G H S A H L N F P E L A H E F P R P A S S S P K D
 
AT2G35700.1     I Q A A A A A A A A A V A I D M D V E T S S P S P S P T V T E T S S P A M I A L - - - - - - - - - - - - - - - - - - - -
pt010682_POPTR_    I Q A A A A L A A - - - - - - - - - - T L S C K T S Q K G R E T E A E A E L M L P R S L D S T L A S N E T Q E Y S L N S
 
AT2G35700.1     - - - - - S D D A F S D L P D L L L N V N H N I D - - - - - - - - - - - - - - - - - - G F W D S F P Y E E P F L - - S Q
pt010682_POPTR_    P L R D D D D D T F I D L P D I L Q G I S H Q F D E F C Y L S P W Q P V G T E T S D V G F W H - - - H E E P S L W E Y Q
 
AT2G35700.1     S Y - - - -
pt010682_POPTR_    S S R N I Y
 
0