fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G35700.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm011442 FLDLPDLSLDLSHGAD in 189/230 AT2G44940.1 1st_not 0.546712802 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G35700.1     --MERDDCRRFQDSPAQTT-----------------ERRVKYKPKKKRAKDDDDEKVVSK
gm011442_Glyma0 MVMEESNPLDNEVQPTTSSSSFTITTPSTSSSSSIEEATNTTKEKKKKANSNE-----GK
                  **..:    : .*: ::                 *   . * ***:*:.::     .*

AT2G35700.1     HPNFRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNFP
gm011442_Glyma0 HPTYRGVRMRQWGKWVSEIREPRKKSRIWLGTFPTPDMAARAHDVAALTIKGSSAYLNFP
                **.:******************:**********.*.:***********:***.**:****

AT2G35700.1     ELAYHLPRPASADPKDIQAAAAAAAAA----VAIDMDVETSSPSPSPTVTETSSPAMIAL
gm011442_Glyma0 ELADELPRPASTSPKDIQAAAAKAAALDFGHRSHDAESELSRAVSSSILTQASSSSSNSS
                *** .******:.********* ***      : * : * * . .*. :*::**.:  : 

AT2G35700.1     S----DDAFSDLPDLLLNVNHNIDGFWDS--------------FPYEEPFLSQSY
gm011442_Glyma0 SLKGVDDTFLDLPDLSLDLSHGADEFHYSSAWLVAGAEHIELGFRLEDPFLWESY
                *    **:* ***** *::.*. * *  *              *  *:*** :**
BoxShade v3.31 C (beta, 970507) Output
AT2G35700.1     - - M E R D D C R R F Q D S P A Q T T - - - - - - - - - - - - - - - - - E R R V K Y K P K K K R A K D D D D E K V V S K
gm011442_Glyma0    M V M E E S N P L D N E V Q P T T S S S S F T I T T P S T S S S S S I E E A T N T T K E K K K K A N S N E - - - - - G K
 
AT2G35700.1     H P N F R G V R M R Q W G K W V S E I R E P K K K S R I W L G T F S T A E M A A R A H D V A A L A I K G G S A H L N F P
gm011442_Glyma0    H P T Y R G V R M R Q W G K W V S E I R E P R K K S R I W L G T F P T P D M A A R A H D V A A L T I K G S S A Y L N F P
 
AT2G35700.1     E L A Y H L P R P A S A D P K D I Q A A A A A A A A A - - - - V A I D M D V E T S S P S P S P T V T E T S S P A M I A L
gm011442_Glyma0    E L A D E L P R P A S T S P K D I Q A A A A K A A A L D F G H R S H D A E S E L S R A V S S S I L T Q A S S S S S N S S
 
AT2G35700.1     S - - - - D D A F S D L P D L L L N V N H N I D G F W D S - - - - - - - - - - - - - - F P Y E E P F L S Q S Y
gm011442_Glyma0    S L K G V D D T F L D L P D L S L D L S H G A D E F H Y S S A W L V A G A E H I E L G F R L E D P F L W E S Y
 
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