fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G36026.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt006568 not found in 116aa AT2G36026.1 1st_1st 0.487179487 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G36026.1     MTTGKSKKKKMVLKAVSVVDIGCGNCKFPSLSSFFNPSPKKPRLYSSNYGHCHSSTPTTA
pt006568_POPTR_ -----------------------------------------------------MDTP---
                                                                      .**   

AT2G36026.1     SSSSAVPSTSHWFSDTSSSSATPSAA---------AVAVEKDSDDPYLDFRQSMLQMILE
pt006568_POPTR_ ---------PHFFSDTGNNMKCSTAVRGFGRVGGESVAVEKDSDDPYLDFRHSMLQMILE
                         .*:****...   .:*.         :***************:********

AT2G36026.1     NEIYSKNDLRELLHCFLSLNEPYHHGIIIRAFSEIWDGVFSAAKRRGDVQESPLVHRHGS
pt006568_POPTR_ KEIYSKDDLRQLLDCFLQLNSPYYHGVIIRAFTEIWNGVFSM---RTDTT---------S
                :*****:***:**.***.**.**:**:*****:***:****    * *.          *

AT2G36026.1     RASHRN-HYHRSK
pt006568_POPTR_ TGSEKQLHYYYGC
                 .*.:: **: .
BoxShade v3.31 C (beta, 970507) Output
AT2G36026.1     M T T G K S K K K K M V L K A V S V V D I G C G N C K F P S L S S F F N P S P K K P R L Y S S N Y G H C H S S T P T T A
pt006568_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D T P - - -
 
AT2G36026.1     S S S S A V P S T S H W F S D T S S S S A T P S A A - - - - - - - - - A V A V E K D S D D P Y L D F R Q S M L Q M I L E
pt006568_POPTR_    - - - - - - - - - P H F F S D T G N N M K C S T A V R G F G R V G G E S V A V E K D S D D P Y L D F R H S M L Q M I L E
 
AT2G36026.1     N E I Y S K N D L R E L L H C F L S L N E P Y H H G I I I R A F S E I W D G V F S A A K R R G D V Q E S P L V H R H G S
pt006568_POPTR_    K E I Y S K D D L R Q L L D C F L Q L N S P Y Y H G V I I R A F T E I W N G V F S M - - - R T D T T - - - - - - - - - S
 
AT2G36026.1     R A S H R N - H Y H R S K
pt006568_POPTR_    T G S E K Q L H Y Y Y G C
 
0