fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G36026.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm007629 not found in 190aa AT2G36026.1 not_1st 0.5 II
Gm004525 not found in 169aa AT2G36026.1 not_1st 0.495726495 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G36026.1     MTTGKSKKKKMVLKAVSVVDIGCGNCKFPS-LSSFFNPSPKKPRLY-SSNY-GHCHSSTP
gm004525_Glyma0 MS---SSRKKLVLNTVS-VSLGCGSCRRPGLLRHIFHPKRRPK----KPAYQAH------
gm007629_Glyma0 MS---GSRKKLLLNTVS-VKLGCGTCRRPS-LRRIFHPKPKPKNLNNNTNYRKHKHS---
                *:   ..:**::*::** *.:***.*: *. *  :*:*. :      .. *  *      

AT2G36026.1     TTASSSSAVPS--TSHWFSDTSSSSATPSAA-----------------------------
gm004525_Glyma0 -------------GFHWDDTATSSSTTNASTAATFSPCYAEASAQFSN----------YG
gm007629_Glyma0 ---SSSSASSSFFASQWGGDSTSATPTNTNT--TFSP-YVD-SSHFSDSDSYVKAVGGLG
                               :* . ::*::.* : :                             

AT2G36026.1     -----AVAVEKDSDDPYLDFRQSMLQMILENEIYSKNDLRELLHCFLSLNEPYHHGIIIR
gm004525_Glyma0 R----GVAVEKDSDDPYLDFRHSMLQMILENEIYSKDDLRELLNCFLQLNSPDHHGVIVR
gm007629_Glyma0 RAGKEGVAVEKDSDDPYLDFRHSMLQMILENEIYSKQDLRELLNCFLQLNSPHHHGVIVR
                     .***************:**************:******:***.**.* ***:*:*

AT2G36026.1     AFSEIWDGVFSAAKRRGDVQESPLVHRHGSRASHRNHYHRSK---
gm004525_Glyma0 AFTEIWNGVFS-------------VRRSGS--STGFHLNRKSRDF
gm007629_Glyma0 AFTEIWNGVFS-------------VRSSS-------HIHLKPREF
                **:***:****             *:  .       * : .
BoxShade v3.31 C (beta, 970507) Output
AT2G36026.1     M T T G K S K K K K M V L K A V S V V D I G C G N C K F P S - L S S F F N P S P K K P R L Y - S S N Y - G H C H S S T P
gm004525_Glyma0    M S - - - S S R K K L V L N T V S - V S L G C G S C R R P G L L R H I F H P K R R P K - - - - K P A Y Q A H - - - - - -
gm007629_Glyma0    M S - - - G S R K K L L L N T V S - V K L G C G T C R R P S - L R R I F H P K P K P K N L N N N T N Y R K H K H S - - -
 
AT2G36026.1     T T A S S S S A V P S - - T S H W F S D T S S S S A T P S A A - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm004525_Glyma0    - - - - - - - - - - - - - G F H W D D T A T S S S T T N A S T A A T F S P C Y A E A S A Q F S N - - - - - - - - - - Y G
gm007629_Glyma0    - - - S S S S A S S S F F A S Q W G G D S T S A T P T N T N T - - T F S P - Y V D - S S H F S D S D S Y V K A V G G L G
 
AT2G36026.1     - - - - - A V A V E K D S D D P Y L D F R Q S M L Q M I L E N E I Y S K N D L R E L L H C F L S L N E P Y H H G I I I R
gm004525_Glyma0    R - - - - G V A V E K D S D D P Y L D F R H S M L Q M I L E N E I Y S K D D L R E L L N C F L Q L N S P D H H G V I V R
gm007629_Glyma0    R A G K E G V A V E K D S D D P Y L D F R H S M L Q M I L E N E I Y S K Q D L R E L L N C F L Q L N S P H H H G V I V R
 
AT2G36026.1     A F S E I W D G V F S A A K R R G D V Q E S P L V H R H G S R A S H R N H Y H R S K - - -
gm004525_Glyma0    A F T E I W N G V F S - - - - - - - - - - - - - V R R S G S - - S T G F H L N R K S R D F
gm007629_Glyma0    A F T E I W N G V F S - - - - - - - - - - - - - V R S S S - - - - - - - H I H L K P R E F
 
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