fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G36026.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm027105 not found in 177aa AT2G36026.1 1st_1st 0.512820512 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G36026.1     MTTGKSKKKKMVLKAVSVVDIGCGNCKFPS-LSSFFNPS--PKKP--RLYSSNYGHCHSS
gm027105_Glyma1 MS---SSRKKLVLNTVS-VSLGCGSCRRPRLLRHIFHPKQRPKKPAGQVHGLHWDDTTTS
                *:   *.:**:**::** *.:***.*: *  *  :*:*.  ****  :::. ::..  :*

AT2G36026.1     TPTTASSSSAVPS-----TSHWFSDTSSSSATPSAAAVAVEKDSDDPYLDFRQSMLQMIL
gm027105_Glyma1 STTTNASTAATFSPCYAEASAQFSDF-AETAKAFGRGVAVEKDSDDPYLDFRHSMLQMIL
                :.** :*::*. *     :*  ***  :.:*.. . .***************:*******

AT2G36026.1     ENEIYSKNDLRELLHCFLSLNEPYHHGIIIRAFSEIWDGVFSAAKRRGDVQESPLVHRHG
gm027105_Glyma1 ENEIYSKEDLRELLNCFLQLNSPDHHGVIVRAFTEIWNGVFSVRRRSGS-----------
                *******:******:***.**.* ***:*:***:***:****. :* *.           

AT2G36026.1     SRASHRNHYHRSK
gm027105_Glyma1 STGFHLNRKSRDF
                * . * *:  *.
BoxShade v3.31 C (beta, 970507) Output
AT2G36026.1     M T T G K S K K K K M V L K A V S V V D I G C G N C K F P S - L S S F F N P S - - P K K P - - R L Y S S N Y G H C H S S
gm027105_Glyma1    M S - - - S S R K K L V L N T V S - V S L G C G S C R R P R L L R H I F H P K Q R P K K P A G Q V H G L H W D D T T T S
 
AT2G36026.1     T P T T A S S S S A V P S - - - - - T S H W F S D T S S S S A T P S A A A V A V E K D S D D P Y L D F R Q S M L Q M I L
gm027105_Glyma1    S T T T N A S T A A T F S P C Y A E A S A Q F S D F - A E T A K A F G R G V A V E K D S D D P Y L D F R H S M L Q M I L
 
AT2G36026.1     E N E I Y S K N D L R E L L H C F L S L N E P Y H H G I I I R A F S E I W D G V F S A A K R R G D V Q E S P L V H R H G
gm027105_Glyma1    E N E I Y S K E D L R E L L N C F L Q L N S P D H H G V I V R A F T E I W N G V F S V R R R S G S - - - - - - - - - - -
 
AT2G36026.1     S R A S H R N H Y H R S K
gm027105_Glyma1    S T G F H L N R K S R D F
 
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