fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G36080.1 NSKTLRLFGVNMECQ at 183/244 in AT2G36080.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt007926 NSKRLRLFGVNLECQ in 298/363 AT2G36080.1 1st_1st 0.523809523 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G36080.1     MSINQYSSDFHYHSLMW--QQQQQQQ----------------------------------
pt007926_POPTR_ MSINHFSTDLQ-ETLSWWAQQHQQQQPIMEPNPNASSSTPNEPPNISNPNSSWPPHHSWL
                ****::*:*:: .:* *  **:****                                  

AT2G36080.1     -----------------------------------QHQND--------VVEEKEALFEKP
pt007926_POPTR_ NPYNTAQQPSSMFLPQNPTLNFNLNEEDDEDQDHEQQQQDETQQEQEVLVLDKEPMFEKP
                                                   *:*:*        :* :**.:****

AT2G36080.1     LTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSYWNSSQ
pt007926_POPTR_ LTPSDVGKLNRLVIPKQHAEKYFPL---SGDSVDKGLLLSFEDESGRYWKFRYSYWNSSQ
                ********************:****   :.*:*:*****.****.*: *:**********

AT2G36080.1     SYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRRRGDSSS-------------
pt007926_POPTR_ SYVLTKGWSRYVKEKQLDAGDVVLFERHRTDGDRLFIGWRRRGESGSNSGVMVQGSGGGV
                ***************:*********.***:**.*:********:*.*             

AT2G36080.1     --------SSDSYRHVQSNASLQ-------------YYP---HAG--AQAVESQRGNSKT
pt007926_POPTR_ WSRGILYPSSSSGPHHLSSSNIQHDLGANVTAANVPYQPYCLHAGSIAQNQTTPLGNSKR
                        **.*  *  *.:.:*             * *   ***  **   :  **** 

AT2G36080.1     LRLFGVNMECQLDSDWSEPSTPDGSNTYTTN---HDQFHFYPQQQHYPPPYY--MDISFT
pt007926_POPTR_ LRLFGVNLECQLDG--SEPSTPDGSSVSSLQGPGHPQ--FYSQSSYSSNSTHGQMDIPFS
                *******:*****.  *********.. : :   * *  **.*..: . . :  ***.*:

AT2G36080.1     GDMNRTS----
pt007926_POPTR_ GDVHRMRNRRG
                **::*
BoxShade v3.31 C (beta, 970507) Output
AT2G36080.1     M S I N Q Y S S D F H Y H S L M W - - Q Q Q Q Q Q Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt007926_POPTR_    M S I N H F S T D L Q - E T L S W W A Q Q H Q Q Q Q P I M E P N P N A S S S T P N E P P N I S N P N S S W P P H H S W L
 
AT2G36080.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Q H Q N D - - - - - - - - V V E E K E A L F E K P
pt007926_POPTR_    N P Y N T A Q Q P S S M F L P Q N P T L N F N L N E E D D E D Q D H E Q Q Q Q D E T Q Q E Q E V L V L D K E P M F E K P
 
AT2G36080.1     L T P S D V G K L N R L V I P K Q H A E R Y F P L A A A A A D A V E K G L L L C F E D E E G K P W R F R Y S Y W N S S Q
pt007926_POPTR_    L T P S D V G K L N R L V I P K Q H A E K Y F P L - - - S G D S V D K G L L L S F E D E S G R Y W K F R Y S Y W N S S Q
 
AT2G36080.1     S Y V L T K G W S R Y V K E K H L D A G D V V L F H R H R S D G G R F F I G W R R R G D S S S - - - - - - - - - - - - -
pt007926_POPTR_    S Y V L T K G W S R Y V K E K Q L D A G D V V L F E R H R T D G D R L F I G W R R R G E S G S N S G V M V Q G S G G G V
 
AT2G36080.1     - - - - - - - - S S D S Y R H V Q S N A S L Q - - - - - - - - - - - - - Y Y P - - - H A G - - A Q A V E S Q R G N S K T
pt007926_POPTR_    W S R G I L Y P S S S S G P H H L S S S N I Q H D L G A N V T A A N V P Y Q P Y C L H A G S I A Q N Q T T P L G N S K R
 
AT2G36080.1     L R L F G V N M E C Q L D S D W S E P S T P D G S N T Y T T N - - - H D Q F H F Y P Q Q Q H Y P P P Y Y - - M D I S F T
pt007926_POPTR_    L R L F G V N L E C Q L D G - - S E P S T P D G S S V S S L Q G P G H P Q - - F Y S Q S S Y S S N S T H G Q M D I P F S
 
AT2G36080.1     G D M N R T S - - - -
pt007926_POPTR_    G D V H R M R N R R G
 
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