fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G36080.1 NSKTLRLFGVNMECQ at 183/244 in AT2G36080.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb028463 SSRQLRLFGVNLDCG in 273/322 AT2G36080.1 1st_1st 0.421052631 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G36080.1     --------MSINQYSSDFHYHSLMW----QQQQQQQQHQNDVVEEKEALFEKPLTPSDVG
Sb028463_Sorbi1 LFLSSSRRMAMNHLSQE-HPQAWPWGVAMYTNLHYQHHY-----EKEHLFEKPLTPSDVG
                        *::*: *.: * ::  *      : : *:*      *** ************

AT2G36080.1     KLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSYWNSSQSYVLTKG
Sb028463_Sorbi1 KLNRLVIPKQHAERYFPL---SGDSGEKGLILSFEDEAGKPWRFRYSYWTSSQSYVLTKG
                ******************   :.*: ****:*.**** ***********.**********

AT2G36080.1     WSRYVKEKHLDAGDVVLFHRHRS--DGGRFFIGWRRRGDSSS------------------
Sb028463_Sorbi1 WSRYVKEKQLDAGDVVHFERMRSFGMGDRLFISYRRHGESATVAAAPPPPPPPPAVRVVA
                ********:******* *.* **   *.*:**.:**:*:*::                  

AT2G36080.1     -----------------------------SSDSYRHV--QSNASLQYYPHAGAQAVESQR
Sb028463_Sorbi1 PAQSTGGGEQQPWSPMCYSTSGSYPTSPANSHAYRHSVDHDHSNMQ---HAGES--QSDR
                                             .*.:***   :.::.:*   *** .  :*:*

AT2G36080.1     GN----------SKTLRLFGVNMECQLDSDWSEPSTPDG------SNTYTTNH-DQFHFY
Sb028463_Sorbi1 DNRSCSAASAPSSRQLRLFGVNLDCGPGPEL-EPETPTAMYGYMHQSPYTSNNWSALKIH
                .*          *: *******::*  ..:  **.** .      ...**:*: . ::::

AT2G36080.1     PQQQHYPPPYYMDISFTGDMNRTS
Sb028463_Sorbi1 QNLTHHI-----------------
                 :  *:
BoxShade v3.31 C (beta, 970507) Output
AT2G36080.1     - - - - - - - - M S I N Q Y S S D F H Y H S L M W - - - - Q Q Q Q Q Q Q Q H Q N D V V E E K E A L F E K P L T P S D V G
Sb028463_Sorbi1    L F L S S S R R M A M N H L S Q E - H P Q A W P W G V A M Y T N L H Y Q H H Y - - - - - E K E H L F E K P L T P S D V G
 
AT2G36080.1     K L N R L V I P K Q H A E R Y F P L A A A A A D A V E K G L L L C F E D E E G K P W R F R Y S Y W N S S Q S Y V L T K G
Sb028463_Sorbi1    K L N R L V I P K Q H A E R Y F P L - - - S G D S G E K G L I L S F E D E A G K P W R F R Y S Y W T S S Q S Y V L T K G
 
AT2G36080.1     W S R Y V K E K H L D A G D V V L F H R H R S - - D G G R F F I G W R R R G D S S S - - - - - - - - - - - - - - - - - -
Sb028463_Sorbi1    W S R Y V K E K Q L D A G D V V H F E R M R S F G M G D R L F I S Y R R H G E S A T V A A A P P P P P P P P A V R V V A
 
AT2G36080.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S S D S Y R H V - - Q S N A S L Q Y Y P H A G A Q A V E S Q R
Sb028463_Sorbi1    P A Q S T G G G E Q Q P W S P M C Y S T S G S Y P T S P A N S H A Y R H S V D H D H S N M Q - - - H A G E S - - Q S D R
 
AT2G36080.1     G N - - - - - - - - - - S K T L R L F G V N M E C Q L D S D W S E P S T P D G - - - - - - S N T Y T T N H - D Q F H F Y
Sb028463_Sorbi1    D N R S C S A A S A P S S R Q L R L F G V N L D C G P G P E L - E P E T P T A M Y G Y M H Q S P Y T S N N W S A L K I H
 
AT2G36080.1     P Q Q Q H Y P P P Y Y M D I S F T G D M N R T S
Sb028463_Sorbi1    Q N L T H H I - - - - - - - - - - - - - - - - -
 
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