fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G36080.1 NSKTLRLFGVNMECQ at 183/244 in AT2G36080.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb028463 SSRQLRLFGVNLDCG in 273/322 AT2G36080.1 1st_1st 0.421052631 Ia
Sb016626 PSRKLRLFGVNLDCG in 226/270 AT2G36080.1 not_1st 0.418546365 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G36080.1     --------MSINQYS--------------SDFHYHSLMWQQQQQQQQHQNDVVEEKEALF
Sb028463_Sorbi1 LFLSSSRRMAMNHLSQEHPQAWPWGVAMYTNLHY------------QHH----YEKEHLF
Sb016626_Sorbi1 --------MAMHHLAQGHPQAWPWGMAMYTNLHYH-----------QHHH--QYEREHLF
                        *:::: :              :::**            **:     *:* **

AT2G36080.1     EKPLTPSDVGKLNRLVIPKQHAERYFPL-AAAAADAVEKGLLLCFEDEEGKPWRFRYSYW
Sb028463_Sorbi1 EKPLTPSDVGKLNRLVIPKQHAERYFPL----SGDSGEKGLILSFEDEAGKPWRFRYSYW
Sb016626_Sorbi1 EKPLTPSDVGKLNRLVIPKQHAERYFPLGGNGAGDGSDKGLLLAFEDEAGKPWRFRYSYW
                ****************************    :.*. :***:*.**** ***********

AT2G36080.1     NSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHR---SDGGRFFIGWRRRGDS--------
Sb028463_Sorbi1 TSSQSYVLTKGWSRYVKEKQLDAGDVVHFERMR-SFGMGDRLFISYRRHGESATVAAAPP
Sb016626_Sorbi1 TSSQSYVLTKGWSRYVKEKRLDAGDVVRFERVRGGLGTGDRLFICCRRRGES----AAPT
                .******************:******* *.* *   . *.*:**  **:*:*        

AT2G36080.1     ------------------------------SSSSDSYRHVQSNASLQYY-----------
Sb028463_Sorbi1 PPPPPPAVRVVAPAQSTGGGEQQPWSPMCYSTSG-SYP--TSPANSHAYRHSVDHDHSNM
Sb016626_Sorbi1 PTPPLP-VRAPAPALN-AAGEQQPWSPMCYSTSGSSYP--TSPASPYAY-------HNDT
                                              *:*. **    * *.   *           

AT2G36080.1     PHAGAQAVE-SQRGN-------SKTLRLFGVNMECQLDSDWSEPSTPDGSNTYTTNHDQF
Sb028463_Sorbi1 QHAGESQSDRDNRSCSAASAPSSRQLRLFGVNLDCGPGPE-LEPETPTAMYGY-------
Sb016626_Sorbi1 PHAGEA----DAKSSGTPTAP-SRKLRLFGVNLDCGPEPE-PEPETPTAMYSY-------
                 ***      . :.        *: *******::*   .:  **.** .   *       

AT2G36080.1     HFYPQQQHYPPPYYMDI----SFTGDM----NRTS--
Sb028463_Sorbi1 ------MHQSP--YTS-----NNWSALKIHQNLTHHI
Sb016626_Sorbi1 ------MHQSP--YAAVSAVPSYWGSS----------
                       * .*  *       .  .
BoxShade v3.31 C (beta, 970507) Output
AT2G36080.1     - - - - - - - - M S I N Q Y S - - - - - - - - - - - - - - S D F H Y H S L M W Q Q Q Q Q Q Q Q H Q N D V V E E K E A L F
Sb028463_Sorbi1    L F L S S S R R M A M N H L S Q E H P Q A W P W G V A M Y T N L H Y - - - - - - - - - - - - Q H H - - - - Y E K E H L F
Sb016626_Sorbi1    - - - - - - - - M A M H H L A Q G H P Q A W P W G M A M Y T N L H Y H - - - - - - - - - - - Q H H H - - Q Y E R E H L F
 
AT2G36080.1     E K P L T P S D V G K L N R L V I P K Q H A E R Y F P L - A A A A A D A V E K G L L L C F E D E E G K P W R F R Y S Y W
Sb028463_Sorbi1    E K P L T P S D V G K L N R L V I P K Q H A E R Y F P L - - - - S G D S G E K G L I L S F E D E A G K P W R F R Y S Y W
Sb016626_Sorbi1    E K P L T P S D V G K L N R L V I P K Q H A E R Y F P L G G N G A G D G S D K G L L L A F E D E A G K P W R F R Y S Y W
 
AT2G36080.1     N S S Q S Y V L T K G W S R Y V K E K H L D A G D V V L F H R H R - - - S D G G R F F I G W R R R G D S - - - - - - - -
Sb028463_Sorbi1    T S S Q S Y V L T K G W S R Y V K E K Q L D A G D V V H F E R M R - S F G M G D R L F I S Y R R H G E S A T V A A A P P
Sb016626_Sorbi1    T S S Q S Y V L T K G W S R Y V K E K R L D A G D V V R F E R V R G G L G T G D R L F I C C R R R G E S - - - - A A P T
 
AT2G36080.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S S S S D S Y R H V Q S N A S L Q Y Y - - - - - - - - - - -
Sb028463_Sorbi1    P P P P P P A V R V V A P A Q S T G G G E Q Q P W S P M C Y S T S G - S Y P - - T S P A N S H A Y R H S V D H D H S N M
Sb016626_Sorbi1    P T P P L P - V R A P A P A L N - A A G E Q Q P W S P M C Y S T S G S S Y P - - T S P A S P Y A Y - - - - - - - H N D T
 
AT2G36080.1     P H A G A Q A V E - S Q R G N - - - - - - - S K T L R L F G V N M E C Q L D S D W S E P S T P D G S N T Y T T N H D Q F
Sb028463_Sorbi1    Q H A G E S Q S D R D N R S C S A A S A P S S R Q L R L F G V N L D C G P G P E - L E P E T P T A M Y G Y - - - - - - -
Sb016626_Sorbi1    P H A G E A - - - - D A K S S G T P T A P - S R K L R L F G V N L D C G P E P E - P E P E T P T A M Y S Y - - - - - - -
 
AT2G36080.1     H F Y P Q Q Q H Y P P P Y Y M D I - - - - S F T G D M - - - - N R T S - -
Sb028463_Sorbi1    - - - - - - M H Q S P - - Y T S - - - - - N N W S A L K I H Q N L T H H I
Sb016626_Sorbi1    - - - - - - M H Q S P - - Y A A V S A V P S Y W G S S - - - - - - - - - -
 
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