fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G36080.1 NSKTLRLFGVNMECQ at 183/244 in AT2G36080.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm007617 SGRVLRLFGVNMECQ in 137/188 AT2G36080.1 not_1st 0.451127819 II
Gm004534 SSRVLRLFGVNMECQ in 275/344 AT2G36080.1 not_1st 0.431077694 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G36080.1     MSINQYSSDFHYHSLMWQQQQQQQ----------------------QHQND---------
gm007617_Glyma0 ------------------------------------------------------------
gm004534_Glyma0 MSTNHYTMDLPEPTLWWPHPHQQQLTLIDPDPLPLNLNNDDNDNGDDNDNDENQTVTTTT
                                                                            

AT2G36080.1     ------VVEEKEALFEKPLTPSDVGKLNRLVIPKQHAERYFPLA-AAAADAVEKGLLLCF
gm007617_Glyma0 -------------MFEKPLTPSDVGKLNRLVIPKQHAEKHFPLD-----SSAAKGLLLSF
gm004534_Glyma0 TGGEEEIINNKEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPLSGGDSGSSECKGLLLSF
                             :************************::***      .:  *****.*

AT2G36080.1     EDEEGKPWRFRYSYWNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR
gm007617_Glyma0 EDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLHAGDVVLFHRHRSLPQRFFISCSR
gm004534_Glyma0 EDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLFQRHRADAQRLFIGWRR
                ***.** *************************:*:*.*******:***:   *:**.  *

AT2G36080.1     RGDSSSSSDSYRHVQSNAS------------------LQYYP------------------
gm007617_Glyma0 RQPN----PVPAH------------------------RG---------------------
gm004534_Glyma0 RRQSD-ALPPPAHVSSRKSGGDGNSSKNEGDVGVGWTRGFYPAHHPYPTHHHHPSPYHHQ
                *  .        *                                               

AT2G36080.1     -----HA--GAQAV-----------ESQRGNSKTLRLFGVNMECQLD-SDWSEPSTPDGS
gm007617_Glyma0 ---------GSQGQNE-TTPGGN--SSSSGSGRVLRLFGVNMECQPDNHNDSQNSTPECS
gm004534_Glyma0 QDDSLHAVRGSQGQNQRTRPVGNSSSSSSSSSRVLRLFGVNMECQPE-HDDSGPSTPQCS
                         *:*.            .*. ...:.*********** :  : *  ***: *

AT2G36080.1     NTYTTN-----------HDQFHFYPQQQHY---PPPYYMDISFTGDMNRTS
gm007617_Glyma0 --Y---------------THL-YHHQTSSYSSSSNPHHHMVPQQP------
gm004534_Glyma0 --YNTNNILPSTQGTDIHSHLNFYQQQQTSNSKPPPHHMMIRHQPYYY---
                  *                :: :: * .     . *::  :
BoxShade v3.31 C (beta, 970507) Output
AT2G36080.1     M S I N Q Y S S D F H Y H S L M W Q Q Q Q Q Q Q - - - - - - - - - - - - - - - - - - - - - - Q H Q N D - - - - - - - - -
gm007617_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm004534_Glyma0    M S T N H Y T M D L P E P T L W W P H P H Q Q Q L T L I D P D P L P L N L N N D D N D N G D D N D N D E N Q T V T T T T
 
AT2G36080.1     - - - - - - V V E E K E A L F E K P L T P S D V G K L N R L V I P K Q H A E R Y F P L A - A A A A D A V E K G L L L C F
gm007617_Glyma0    - - - - - - - - - - - - - M F E K P L T P S D V G K L N R L V I P K Q H A E K H F P L D - - - - - S S A A K G L L L S F
gm004534_Glyma0    T G G E E E I I N N K E P M F E K P L T P S D V G K L N R L V I P K Q H A E K Y F P L S G G D S G S S E C K G L L L S F
 
AT2G36080.1     E D E E G K P W R F R Y S Y W N S S Q S Y V L T K G W S R Y V K E K H L D A G D V V L F H R H R S D G G R F F I G W R R
gm007617_Glyma0    E D E S G K C W R F R Y S Y W N S S Q S Y V L T K G W S R Y V K D K R L H A G D V V L F H R H R S L P Q R F F I S C S R
gm004534_Glyma0    E D E S G K C W R F R Y S Y W N S S Q S Y V L T K G W S R Y V K D K R L D A G D V V L F Q R H R A D A Q R L F I G W R R
 
AT2G36080.1     R G D S S S S S D S Y R H V Q S N A S - - - - - - - - - - - - - - - - - - L Q Y Y P - - - - - - - - - - - - - - - - - -
gm007617_Glyma0    R Q P N - - - - P V P A H - - - - - - - - - - - - - - - - - - - - - - - - R G - - - - - - - - - - - - - - - - - - - - -
gm004534_Glyma0    R R Q S D - A L P P P A H V S S R K S G G D G N S S K N E G D V G V G W T R G F Y P A H H P Y P T H H H H P S P Y H H Q
 
AT2G36080.1     - - - - - H A - - G A Q A V - - - - - - - - - - - E S Q R G N S K T L R L F G V N M E C Q L D - S D W S E P S T P D G S
gm007617_Glyma0    - - - - - - - - - G S Q G Q N E - T T P G G N - - S S S S G S G R V L R L F G V N M E C Q P D N H N D S Q N S T P E C S
gm004534_Glyma0    Q D D S L H A V R G S Q G Q N Q R T R P V G N S S S S S S S S S R V L R L F G V N M E C Q P E - H D D S G P S T P Q C S
 
AT2G36080.1     N T Y T T N - - - - - - - - - - - H D Q F H F Y P Q Q Q H Y - - - P P P Y Y M D I S F T G D M N R T S
gm007617_Glyma0    - - Y - - - - - - - - - - - - - - - T H L - Y H H Q T S S Y S S S S N P H H H M V P Q Q P - - - - - -
gm004534_Glyma0    - - Y N T N N I L P S T Q G T D I H S H L N F Y Q Q Q Q T S N S K P P P H H M M I R H Q P Y Y Y - - -
 
0